RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PNMA8AQ86V59 439 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-221ENST00000583080 CNTROBQ8N137 903 aa21.45■■□□□ 1.02
SREBF1-221ENST00000583080 ZBTB3Q9H5J0 574 aa21.45■■□□□ 1.02
SREBF1-221ENST00000583080 RRP7AQ9Y3A4 280 aaKnown RBP21.45■■□□□ 1.02
SREBF1-221ENST00000583080 IBTKQ9P2D0 1353 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-221ENST00000583080 MYL6BP14649 208 aa21.44■■□□□ 1.02
SREBF1-221ENST00000583080 KIF6Q6ZMV9 814 aa21.44■■□□□ 1.02
SREBF1-221ENST00000583080 JDP2Q8WYK2 163 aa21.44■■□□□ 1.02
SREBF1-221ENST00000583080 RPGRQ92834 1020 aaKnown RBP21.44■■□□□ 1.02
SREBF1-221ENST00000583080 PRDM10Q9NQV6 1147 aa21.44■■□□□ 1.02
SREBF1-221ENST00000583080 RASSF10A6NK89 507 aa21.43■■□□□ 1.02
SREBF1-221ENST00000583080 CTCFP49711 727 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-221ENST00000583080 C3orf67Q6ZVT6 689 aa21.43■■□□□ 1.02
SREBF1-221ENST00000583080 AIDAQ96BJ3 306 aa21.43■■□□□ 1.02
SREBF1-221ENST00000583080 GJA3Q9Y6H8 435 aa21.43■■□□□ 1.02
SREBF1-221ENST00000583080 HOXA10P31260 410 aaPredicted RBP21.42■■□□□ 1.02
SREBF1-221ENST00000583080 SUSD4Q5VX71 490 aa21.42■■□□□ 1.02
SREBF1-221ENST00000583080 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
SREBF1-221ENST00000583080 WBP1LQ9NX94 342 aa21.42■■□□□ 1.02
SREBF1-221ENST00000583080 NTSR2O95665 410 aa21.41■■□□□ 1.02
SREBF1-221ENST00000583080 SCNN1DP51172 638 aa21.41■■□□□ 1.02
SREBF1-221ENST00000583080 EIF6P56537 245 aaKnown RBP21.41■■□□□ 1.02
SREBF1-221ENST00000583080 FMR1Q06787 632 aaKnown RBP eCLIP21.41■■□□□ 1.02
SREBF1-221ENST00000583080 CC2D2BQ6DHV5 1058 aa21.41■■□□□ 1.02
SREBF1-221ENST00000583080 PLEKHF1Q96S99 279 aa21.41■■□□□ 1.02
SREBF1-221ENST00000583080 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
SREBF1-221ENST00000583080 PPEF1O14829 653 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-221ENST00000583080 LBX1P52954 281 aa21.4■■□□□ 1.02
SREBF1-221ENST00000583080 ZNF34Q8IZ26 560 aa21.4■■□□□ 1.02
SREBF1-221ENST00000583080 THSD7BQ9C0I4 1608 aa21.4■■□□□ 1.02
SREBF1-221ENST00000583080 EPS15P42566 896 aa21.39■■□□□ 1.01
SREBF1-221ENST00000583080 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
SREBF1-221ENST00000583080 DEFB115Q30KQ5 88 aa21.39■■□□□ 1.01
SREBF1-221ENST00000583080 LARGE2Q8N3Y3 721 aa21.39■■□□□ 1.01
SREBF1-221ENST00000583080 ABT1Q9ULW3 272 aaKnown RBP21.39■■□□□ 1.01
SREBF1-221ENST00000583080 NEFMP07197 916 aa21.38■■□□□ 1.01
SREBF1-221ENST00000583080 LMOD1P29536 600 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-221ENST00000583080 RBM17Q96I25 401 aaKnown RBP21.38■■□□□ 1.01
SREBF1-221ENST00000583080 DDX21Q9NR30 783 aaKnown RBP eCLIP21.38■■□□□ 1.01
SREBF1-221ENST00000583080 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
SREBF1-221ENST00000583080 HSPA8P11142 646 aaKnown RBP21.37■■□□□ 1.01
SREBF1-221ENST00000583080 CRAMP1Q96RY5 1269 aa21.37■■□□□ 1.01
SREBF1-221ENST00000583080 GIGYF2Q6Y7W6 1299 aaKnown RBP21.36■■□□□ 1.01
SREBF1-221ENST00000583080 LRP10Q7Z4F1 713 aa21.36■■□□□ 1.01
SREBF1-221ENST00000583080 ERBB4Q15303 1308 aa21.35■■□□□ 1.01
SREBF1-221ENST00000583080 NIM1KQ8IY84 436 aa21.35■■□□□ 1.01
SREBF1-221ENST00000583080 LAMB2P55268 1798 aa21.34■■□□□ 1.01
SREBF1-221ENST00000583080 TRAF5O00463 557 aa21.34■■□□□ 1.01
SREBF1-221ENST00000583080 PPIP5K2O43314 1243 aa21.34■■□□□ 1.01
SREBF1-221ENST00000583080 AOC3Q16853 763 aa21.34■■□□□ 1.01
SREBF1-221ENST00000583080 PROSER3Q2NL68 480 aa21.34■■□□□ 1.01
SREBF1-221ENST00000583080 TRPM7Q96QT4 1865 aa21.33■■□□□ 1.01
SREBF1-221ENST00000583080 ANXA1P04083 346 aa21.33■■□□□ 1.01
SREBF1-221ENST00000583080 PDIA6Q15084 440 aa21.33■■□□□ 1.01
SREBF1-221ENST00000583080 GRIPAP1Q4V328 841 aa21.33■■□□□ 1.01
SREBF1-221ENST00000583080 ANKRD36CQ5JPF3 1778 aa21.33■■□□□ 1
SREBF1-221ENST00000583080 ABCC4O15439 1325 aa21.32■■□□□ 1
SREBF1-221ENST00000583080 MAPK8IP3Q9UPT6 1336 aa21.32■■□□□ 1
SREBF1-221ENST00000583080 PARP10Q53GL7 1025 aa21.32■■□□□ 1
SREBF1-221ENST00000583080 PPP1R42Q7Z4L9 355 aa21.32■■□□□ 1
SREBF1-221ENST00000583080 TSPYL4Q9UJ04 414 aa21.32■■□□□ 1
SREBF1-221ENST00000583080 MAP2K1Q02750 393 aaPredicted RBP21.31■■□□□ 1
SREBF1-221ENST00000583080 CST9Q5W186 159 aa21.31■■□□□ 1
SREBF1-221ENST00000583080 PAXIP1Q6ZW49 1069 aaPredicted RBP21.31■■□□□ 1
SREBF1-221ENST00000583080 USP50Q70EL3 339 aaPredicted RBP21.31■■□□□ 1
SREBF1-221ENST00000583080 CAPNS2Q96L46 248 aa21.31■■□□□ 1
SREBF1-221ENST00000583080 ATP6V0A2Q9Y487 856 aa21.31■■□□□ 1
SREBF1-221ENST00000583080 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
SREBF1-221ENST00000583080 GRM1Q13255 1194 aa21.3■■□□□ 1
SREBF1-221ENST00000583080 CYP4F22Q6NT55 531 aa21.3■■□□□ 1
SREBF1-221ENST00000583080 NLRP3Q96P20 1036 aa21.3■■□□□ 1
SREBF1-221ENST00000583080 UTP14AQ9BVJ6 771 aaKnown RBP21.3■■□□□ 1
SREBF1-221ENST00000583080 GPRC5DQ9NZD1 345 aa21.3■■□□□ 1
SREBF1-221ENST00000583080 CXCL9Q07325 125 aa21.28■■□□□ 1
SREBF1-221ENST00000583080 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
SREBF1-221ENST00000583080 ABHD8Q96I13 439 aa21.28■■□□□ 1
SREBF1-221ENST00000583080 DUOX1Q9NRD9 1551 aa21.27■■□□□ 1
SREBF1-221ENST00000583080 GMPSP49915 693 aaPredicted RBP21.27■■□□□ 1
SREBF1-221ENST00000583080 RTFDC1Q9BY42 306 aaPredicted RBP21.27■■□□□ 1
SREBF1-221ENST00000583080 ADARB2Q9NS39 739 aaKnown RBP21.27■■□□□ 1
SREBF1-221ENST00000583080 ZNRF3Q9ULT6 936 aa21.27■■□□□ 1
SREBF1-221ENST00000583080 TLL2Q9Y6L7 1015 aa21.27■■□□□ 1
SREBF1-221ENST00000583080 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-221ENST00000583080 ECE1P42892 770 aa21.26■□□□□ 0.99
SREBF1-221ENST00000583080 NECTIN2Q92692 538 aa21.26■□□□□ 0.99
SREBF1-221ENST00000583080 TAF1P21675 1872 aa21.26■□□□□ 0.99
SREBF1-221ENST00000583080 RIPK4P57078 832 aa21.25■□□□□ 0.99
SREBF1-221ENST00000583080 DPP8Q6V1X1 898 aaPredicted RBP21.25■□□□□ 0.99
SREBF1-221ENST00000583080 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
SREBF1-221ENST00000583080 XAGE3Q8WTP9 111 aa21.25■□□□□ 0.99
SREBF1-221ENST00000583080 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
SREBF1-221ENST00000583080 GPR101Q96P66 508 aaPredicted RBP21.25■□□□□ 0.99
SREBF1-221ENST00000583080 TMX4Q9H1E5 349 aaPredicted RBP21.25■□□□□ 0.99
SREBF1-221ENST00000583080 AOC2O75106 756 aa21.24■□□□□ 0.99
SREBF1-221ENST00000583080 AIMP1Q12904 312 aaKnown RBP21.24■□□□□ 0.99
SREBF1-221ENST00000583080 COPS6Q7L5N1 327 aa21.24■□□□□ 0.99
SREBF1-221ENST00000583080 SUPT20HQ8NEM7 779 aa21.24■□□□□ 0.99
SREBF1-221ENST00000583080 GLIS2Q9BZE0 524 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-221ENST00000583080 VPS33BQ9H267 617 aa21.24■□□□□ 0.99
SREBF1-221ENST00000583080 PNNQ9H307 717 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1271.6 ms