RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 RASSF7Q02833 373 aa12.64□□□□□ -0.39
GTF3C1-212ENST00000570129 UTP14AQ9BVJ6 771 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-212ENST00000570129 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
GTF3C1-212ENST00000570129 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
GTF3C1-212ENST00000570129 NUP98P52948 1817 aa12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 KLRG2A4D1S0 409 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 GTF2E1P29083 439 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 ST5P78524 1137 aa12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-212ENST00000570129 PDE6BP35913 854 aa12.62□□□□□ -0.39
GTF3C1-212ENST00000570129 FLIIQ13045 1269 aa12.62□□□□□ -0.39
GTF3C1-212ENST00000570129 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-212ENST00000570129 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
GTF3C1-212ENST00000570129 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
GTF3C1-212ENST00000570129 METTL22Q9BUU2 404 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-212ENST00000570129 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 E9PSI1 815 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 NFKBIEO00221 500 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 RGL2O15211 777 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 GRIN3BO60391 1043 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 SLC10A5Q5PT55 438 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 PRPF40BQ6NWY9 871 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 STK31Q9BXU1 1019 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 COL11A2P13942 1736 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 COL4A1P02462 1669 aa12.61□□□□□ -0.39
GTF3C1-212ENST00000570129 PARP10Q53GL7 1025 aa12.6□□□□□ -0.39
GTF3C1-212ENST00000570129 PPP1R42Q7Z4L9 355 aa12.6□□□□□ -0.39
GTF3C1-212ENST00000570129 MASTLQ96GX5 879 aa12.6□□□□□ -0.39
GTF3C1-212ENST00000570129 TNNQ9UQP3 1299 aa12.6□□□□□ -0.39
GTF3C1-212ENST00000570129 NPR1P16066 1061 aa12.59□□□□□ -0.39
GTF3C1-212ENST00000570129 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-212ENST00000570129 FKBP5Q13451 457 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-212ENST00000570129 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
GTF3C1-212ENST00000570129 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
GTF3C1-212ENST00000570129 ZNF526Q8TF50 670 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-212ENST00000570129 NYXQ9GZU5 481 aa12.59□□□□□ -0.39
GTF3C1-212ENST00000570129 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
GTF3C1-212ENST00000570129 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
GTF3C1-212ENST00000570129 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.4
GTF3C1-212ENST00000570129 C9orf131Q5VYM1 1079 aa12.58□□□□□ -0.4
GTF3C1-212ENST00000570129 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-212ENST00000570129 SEC31BQ9NQW1 1179 aa12.58□□□□□ -0.4
GTF3C1-212ENST00000570129 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-212ENST00000570129 IRS4O14654 1257 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-212ENST00000570129 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
GTF3C1-212ENST00000570129 SH3TC1Q8TE82 1336 aa12.57□□□□□ -0.4
GTF3C1-212ENST00000570129 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-212ENST00000570129 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-212ENST00000570129 BEND3Q5T5X7 828 aa12.56□□□□□ -0.4
GTF3C1-212ENST00000570129 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
GTF3C1-212ENST00000570129 CWC25Q9NXE8 425 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-212ENST00000570129 H7C1W4 665 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 BCAR3O75815 825 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 CASP7P55210 303 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 ZBTB38Q8NAP3 1195 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 CELF1Q92879 486 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 CNKSR1Q969H4 720 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 ABCC4O15439 1325 aa12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 IBTKQ9P2D0 1353 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-212ENST00000570129 ARFGEF2Q9Y6D5 1785 aa12.54□□□□□ -0.4
GTF3C1-212ENST00000570129 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-212ENST00000570129 RARSP54136 660 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-212ENST00000570129 GCKRQ14397 625 aa12.54□□□□□ -0.4
GTF3C1-212ENST00000570129 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
GTF3C1-212ENST00000570129 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-212ENST00000570129 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-212ENST00000570129 TAF1P21675 1872 aa12.53□□□□□ -0.4
GTF3C1-212ENST00000570129 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-212ENST00000570129 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
GTF3C1-212ENST00000570129 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-212ENST00000570129 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-212ENST00000570129 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
GTF3C1-212ENST00000570129 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 LINS1Q8NG48 757 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 TTLL11Q8NHH1 800 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 KAZALD1Q96I82 304 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 GREM2Q9H772 168 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 SNED1Q8TER0 1413 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 COL4A5P29400 1685 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 ANKRD36CQ5JPF3 1778 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
GTF3C1-212ENST00000570129 NBPF7P0C2Y1 421 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-212ENST00000570129 GPSM2P81274 684 aa12.5□□□□□ -0.41
GTF3C1-212ENST00000570129 FOXO4P98177 505 aa12.5□□□□□ -0.41
GTF3C1-212ENST00000570129 NEXNQ0ZGT2 675 aa12.5□□□□□ -0.41
GTF3C1-212ENST00000570129 DDX46Q7L014 1031 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms