RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 FLIIQ13045 1269 aa16.55■□□□□ 0.24
MTHFD1-209ENST00000554768 TTLL6Q8N841 843 aa16.55■□□□□ 0.24
MTHFD1-209ENST00000554768 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.24
MTHFD1-209ENST00000554768 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
MTHFD1-209ENST00000554768 TRMT112Q9UI30 125 aaKnown RBP16.55■□□□□ 0.24
MTHFD1-209ENST00000554768 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
MTHFD1-209ENST00000554768 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
MTHFD1-209ENST00000554768 RNF123Q5XPI4 1314 aa16.54■□□□□ 0.24
MTHFD1-209ENST00000554768 STYK1Q6J9G0 422 aa16.54■□□□□ 0.24
MTHFD1-209ENST00000554768 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
MTHFD1-209ENST00000554768 MASTLQ96GX5 879 aa16.54■□□□□ 0.24
MTHFD1-209ENST00000554768 MYD88Q99836 296 aa16.54■□□□□ 0.24
MTHFD1-209ENST00000554768 ADCY9O60503 1353 aa16.53■□□□□ 0.24
MTHFD1-209ENST00000554768 NPR1P16066 1061 aa16.53■□□□□ 0.24
MTHFD1-209ENST00000554768 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
MTHFD1-209ENST00000554768 ZNF428Q96B54 188 aa16.53■□□□□ 0.24
MTHFD1-209ENST00000554768 SH3TC1Q8TE82 1336 aa16.52■□□□□ 0.24
MTHFD1-209ENST00000554768 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.24
MTHFD1-209ENST00000554768 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.24
MTHFD1-209ENST00000554768 CNKSR1Q969H4 720 aa16.52■□□□□ 0.24
MTHFD1-209ENST00000554768 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.23
MTHFD1-209ENST00000554768 ANKRD31Q8N7Z5 1873 aa16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 IGKV5-2P06315 115 aa16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 HOXA10P31260 410 aaPredicted RBP16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 FKBP5Q13451 457 aaPredicted RBP16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 FAM89AQ96GI7 184 aa16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
MTHFD1-209ENST00000554768 MRPL50Q8N5N7 158 aaKnown RBP16.5■□□□□ 0.23
MTHFD1-209ENST00000554768 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
MTHFD1-209ENST00000554768 CWC25Q9NXE8 425 aaPredicted RBP16.5■□□□□ 0.23
MTHFD1-209ENST00000554768 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
MTHFD1-209ENST00000554768 YY1P25490 414 aa16.49■□□□□ 0.23
MTHFD1-209ENST00000554768 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
MTHFD1-209ENST00000554768 PRPF40BQ6NWY9 871 aaKnown RBP16.49■□□□□ 0.23
MTHFD1-209ENST00000554768 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
MTHFD1-209ENST00000554768 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
MTHFD1-209ENST00000554768 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
MTHFD1-209ENST00000554768 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
MTHFD1-209ENST00000554768 CWF19L2Q2TBE0 894 aaKnown RBP16.48■□□□□ 0.23
MTHFD1-209ENST00000554768 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
MTHFD1-209ENST00000554768 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 F6X3S4 739 aa16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 C21orf2O43822 256 aa16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 ALDH1L2Q3SY69 923 aa16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 LINS1Q8NG48 757 aa16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 CRAMP1Q96RY5 1269 aa16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
MTHFD1-209ENST00000554768 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
MTHFD1-209ENST00000554768 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
MTHFD1-209ENST00000554768 IRS4O14654 1257 aaPredicted RBP16.46■□□□□ 0.23
MTHFD1-209ENST00000554768 JARID2Q92833 1246 aaPredicted RBP16.46■□□□□ 0.23
MTHFD1-209ENST00000554768 RBM17Q96I25 401 aaKnown RBP16.46■□□□□ 0.23
MTHFD1-209ENST00000554768 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
MTHFD1-209ENST00000554768 GCKRQ14397 625 aa16.45■□□□□ 0.22
MTHFD1-209ENST00000554768 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
MTHFD1-209ENST00000554768 BEND3Q5T5X7 828 aa16.45■□□□□ 0.22
MTHFD1-209ENST00000554768 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
MTHFD1-209ENST00000554768 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
MTHFD1-209ENST00000554768 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
MTHFD1-209ENST00000554768 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
MTHFD1-209ENST00000554768 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
MTHFD1-209ENST00000554768 H7C1W4 665 aa16.44■□□□□ 0.22
MTHFD1-209ENST00000554768 NFKBIEO00221 500 aa16.43■□□□□ 0.22
MTHFD1-209ENST00000554768 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
MTHFD1-209ENST00000554768 RARSP54136 660 aaKnown RBP16.43■□□□□ 0.22
MTHFD1-209ENST00000554768 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
MTHFD1-209ENST00000554768 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
MTHFD1-209ENST00000554768 PTPRCP08575 1304 aa16.43■□□□□ 0.22
MTHFD1-209ENST00000554768 BBOX1O75936 387 aa16.42■□□□□ 0.22
MTHFD1-209ENST00000554768 PRELPP51888 382 aa16.42■□□□□ 0.22
MTHFD1-209ENST00000554768 BRPF1P55201 1214 aaPredicted RBP16.42■□□□□ 0.22
MTHFD1-209ENST00000554768 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
MTHFD1-209ENST00000554768 ABCC4O15439 1325 aa16.42■□□□□ 0.22
MTHFD1-209ENST00000554768 CDHR2Q9BYE9 1310 aa16.42■□□□□ 0.22
MTHFD1-209ENST00000554768 PDE8AO60658 829 aa16.41■□□□□ 0.22
MTHFD1-209ENST00000554768 CASP7P55210 303 aa16.41■□□□□ 0.22
MTHFD1-209ENST00000554768 RASSF7Q02833 373 aa16.41■□□□□ 0.22
MTHFD1-209ENST00000554768 C9orf131Q5VYM1 1079 aa16.41■□□□□ 0.22
MTHFD1-209ENST00000554768 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
MTHFD1-209ENST00000554768 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 PPEF1O14829 653 aaPredicted RBP16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 CC2D2BQ6DHV5 1058 aa16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
MTHFD1-209ENST00000554768 ALDH1L1O75891 902 aa16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 LMNB1P20700 586 aa16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 GRAPQ13588 217 aa16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 SRCIN1Q9C0H9 1055 aa16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
MTHFD1-209ENST00000554768 LTBP3Q9NS15 1303 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms