RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 UBAP2LQ14157 1087 aaKnown RBP6.69□□□□□ -1.34
VTI1B-203ENST00000554636 GAS2L2Q8NHY3 880 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 CRISPLD1Q9H336 500 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 PHF24Q9UPV7 400 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
VTI1B-203ENST00000554636 ADAMTSL3P82987 1691 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 SIGLEC1Q9BZZ2 1709 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 CDC42BPBQ9Y5S2 1711 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 SERTM1A2A2V5 107 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L15C9J2P7 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L10C9JJH3 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L13C9JLJ4 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L12C9JPN9 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L11C9JVI0 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L21D6R901 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L18D6R9N7 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L22D6RA61 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L17D6RBQ6 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L19D6RCP7 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L20D6RJB6 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 CELA2BP08218 269 aaPredicted RBP6.68□□□□□ -1.34
VTI1B-203ENST00000554636 FGFR3P22607 806 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 NOS2P35228 1153 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 USP17L24Q0WX57 530 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 LBRQ14739 615 aaKnown RBP6.68□□□□□ -1.34
VTI1B-203ENST00000554636 CFAP70Q5T0N1 1121 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 C1orf216Q8TAB5 229 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 ACDQ96AP0 544 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 HINFPQ9BQA5 517 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 ZCCHC2Q9C0B9 1178 aaKnown RBP6.68□□□□□ -1.34
VTI1B-203ENST00000554636 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 ZDHHC3Q9NYG2 299 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 NSFL1CQ9UNZ2 370 aaKnown RBP6.68□□□□□ -1.34
VTI1B-203ENST00000554636 ADAMTS8Q9UP79 889 aa6.68□□□□□ -1.34
VTI1B-203ENST00000554636 CDK11AQ9UQ88 783 aaPredicted RBP6.68□□□□□ -1.34
VTI1B-203ENST00000554636 YEATS2Q9ULM3 1422 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 CDC42BPAQ5VT25 1732 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 ABCC1P33527 1531 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 ARHGAP5Q13017 1502 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 ZFYVE16Q7Z3T8 1539 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 KDM5CP41229 1560 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 KHNYNO15037 678 aaKnown RBP6.67□□□□□ -1.34
VTI1B-203ENST00000554636 ATXN7O15265 892 aaPredicted RBP6.67□□□□□ -1.34
VTI1B-203ENST00000554636 PPP1R12BO60237 982 aaPredicted RBP6.67□□□□□ -1.34
VTI1B-203ENST00000554636 DKK1O94907 266 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 BMP4P12644 408 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 SEC13P55735 322 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 DPYDQ12882 1025 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 PTK7Q13308 1070 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 TEAD4Q15561 434 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 KANK4Q5T7N3 995 aaPredicted RBP6.67□□□□□ -1.34
VTI1B-203ENST00000554636 KLRG1Q96E93 195 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 ZIC5Q96T25 663 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 CFHR5Q9BXR6 569 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 ATXN7L1Q9ULK2 861 aaPredicted RBP6.67□□□□□ -1.34
VTI1B-203ENST00000554636 CHMP3Q9Y3E7 222 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 HCN4Q9Y3Q4 1203 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 BCORL1Q5H9F3 1711 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 SCAPERQ9BY12 1400 aa6.67□□□□□ -1.34
VTI1B-203ENST00000554636 ITSN2Q9NZM3 1697 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 PSMA6P60900 246 aaKnown RBP6.66□□□□□ -1.34
VTI1B-203ENST00000554636 CTBSQ01459 385 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 FIGNL1Q6PIW4 674 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 LRRC69Q6ZNQ3 347 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 SCG3Q8WXD2 468 aaKnown RBP6.66□□□□□ -1.34
VTI1B-203ENST00000554636 NGLY1Q96IV0 654 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 ZMYND15Q9H091 742 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 PCDHGC4Q9Y5F7 938 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 MAGI2Q86UL8 1455 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 EHBP1L1Q8N3D4 1523 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 ARHGEF12Q9NZN5 1544 aa6.66□□□□□ -1.34
VTI1B-203ENST00000554636 EML1O00423 815 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 ARHGEF15O94989 841 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 CD33P20138 364 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 MARSP56192 900 aaKnown RBP6.65□□□□□ -1.34
VTI1B-203ENST00000554636 EFCAB2Q5VUJ9 269 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 NLRP8Q86W28 1048 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 ANKMY2Q8IV38 441 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 NEDD1Q8NHV4 660 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 RHPN1Q8TCX5 695 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 OXCT2Q9BYC2 517 aaPredicted RBP6.65□□□□□ -1.34
VTI1B-203ENST00000554636 NEUROD4Q9HD90 331 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 NDFIP2Q9NV92 336 aa6.65□□□□□ -1.34
VTI1B-203ENST00000554636 GPATCH8Q9UKJ3 1502 aaKnown RBP6.65□□□□□ -1.35
VTI1B-203ENST00000554636 SAMD9LQ8IVG5 1584 aa6.65□□□□□ -1.35
VTI1B-203ENST00000554636 HECW2Q9P2P5 1572 aa6.65□□□□□ -1.35
VTI1B-203ENST00000554636 MADDQ8WXG6 1647 aa6.65□□□□□ -1.35
VTI1B-203ENST00000554636 FAM196BA6NMK8 535 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 M0R2N6 131 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 C2CD2LO14523 706 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 C21orf2O43822 256 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 MAPTP10636 758 aaKnown RBP6.64□□□□□ -1.35
VTI1B-203ENST00000554636 BCRP11274 1271 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 MAP2K3P46734 347 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 ZNF518AQ6AHZ1 1483 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 TIAM1Q13009 1591 aa6.64□□□□□ -1.35
VTI1B-203ENST00000554636 LOC105371045A0A1W2PR82 267 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 C9orf84Q5VXU9 1444 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 ATAD2Q6PL18 1390 aa6.63□□□□□ -1.35
VTI1B-203ENST00000554636 ABCA6Q8N139 1617 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms