RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 FKBP5Q13451 457 aaPredicted RBP22.32■■□□□ 1.16
CDK4-207ENST00000550419 GPR162Q16538 588 aa22.32■■□□□ 1.16
CDK4-207ENST00000550419 ERFEQ4G0M1 354 aa22.32■■□□□ 1.16
CDK4-207ENST00000550419 C2CD5Q86YS7 1000 aa22.32■■□□□ 1.16
CDK4-207ENST00000550419 CCDC24Q8N4L8 307 aa22.32■■□□□ 1.16
CDK4-207ENST00000550419 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
CDK4-207ENST00000550419 DLEC1Q9Y238 1755 aa22.32■■□□□ 1.16
CDK4-207ENST00000550419 GRIN3BO60391 1043 aa22.31■■□□□ 1.16
CDK4-207ENST00000550419 NUTM1Q86Y26 1132 aa22.31■■□□□ 1.16
CDK4-207ENST00000550419 SSH1Q8WYL5 1049 aa22.31■■□□□ 1.16
CDK4-207ENST00000550419 ABCC12Q96J65 1359 aa22.3■■□□□ 1.16
CDK4-207ENST00000550419 ATP5J2-PTCD1G3V325 749 aa22.3■■□□□ 1.16
CDK4-207ENST00000550419 SRGNP10124 158 aa22.3■■□□□ 1.16
CDK4-207ENST00000550419 YBX3P16989 372 aaKnown RBP eCLIP22.3■■□□□ 1.162e-7■□□□□ 9.7
CDK4-207ENST00000550419 NEXNQ0ZGT2 675 aa22.3■■□□□ 1.16
CDK4-207ENST00000550419 CRY2Q49AN0 593 aa22.3■■□□□ 1.16
CDK4-207ENST00000550419 MRPL50Q8N5N7 158 aaKnown RBP22.3■■□□□ 1.16
CDK4-207ENST00000550419 MYD88Q99836 296 aa22.3■■□□□ 1.16
CDK4-207ENST00000550419 TRMT112Q9UI30 125 aaKnown RBP22.3■■□□□ 1.16
CDK4-207ENST00000550419 SH3TC1Q8TE82 1336 aa22.3■■□□□ 1.16
CDK4-207ENST00000550419 BRPF1P55201 1214 aaPredicted RBP22.29■■□□□ 1.16
CDK4-207ENST00000550419 DALRD3Q5D0E6 543 aaKnown RBP22.29■■□□□ 1.16
CDK4-207ENST00000550419 STYK1Q6J9G0 422 aa22.29■■□□□ 1.16
CDK4-207ENST00000550419 DNAAF4Q8WXU2 420 aa22.29■■□□□ 1.16
CDK4-207ENST00000550419 GOLGB1Q14789 3259 aaKnown RBP22.28■■□□□ 1.16
CDK4-207ENST00000550419 PTPRCP08575 1304 aa22.28■■□□□ 1.16
CDK4-207ENST00000550419 IGKV5-2P06315 115 aa22.27■■□□□ 1.16
CDK4-207ENST00000550419 COL11A2P13942 1736 aaPredicted RBP22.27■■□□□ 1.16
CDK4-207ENST00000550419 NPR1P16066 1061 aa22.27■■□□□ 1.16
CDK4-207ENST00000550419 PELP1Q8IZL8 1130 aaKnown RBP22.27■■□□□ 1.16
CDK4-207ENST00000550419 TTLL6Q8N841 843 aa22.27■■□□□ 1.16
CDK4-207ENST00000550419 ZBTB38Q8NAP3 1195 aaPredicted RBP22.27■■□□□ 1.16
CDK4-207ENST00000550419 MASTLQ96GX5 879 aa22.27■■□□□ 1.16
CDK4-207ENST00000550419 CWC25Q9NXE8 425 aaPredicted RBP22.27■■□□□ 1.16
CDK4-207ENST00000550419 LINS1Q8NG48 757 aa22.26■■□□□ 1.15
CDK4-207ENST00000550419 BCS1LQ9Y276 419 aa22.26■■□□□ 1.15
CDK4-207ENST00000550419 HSP90B1P14625 803 aaKnown RBP22.25■■□□□ 1.15
CDK4-207ENST00000550419 RARSP54136 660 aaKnown RBP22.25■■□□□ 1.15
CDK4-207ENST00000550419 CNKSR1Q969H4 720 aa22.25■■□□□ 1.15
CDK4-207ENST00000550419 NLRP3Q96P20 1036 aa22.25■■□□□ 1.15
CDK4-207ENST00000550419 SMC4Q9NTJ3 1288 aa22.25■■□□□ 1.15
CDK4-207ENST00000550419 TNRC6CQ9HCJ0 1690 aaKnown RBP22.25■■□□□ 1.15
CDK4-207ENST00000550419 NEURL1BA8MQ27 555 aa22.24■■□□□ 1.15
CDK4-207ENST00000550419 PCCAP05165 728 aaPredicted RBP22.24■■□□□ 1.15
CDK4-207ENST00000550419 HOXA10P31260 410 aaPredicted RBP22.24■■□□□ 1.15
CDK4-207ENST00000550419 ARFGEF1Q9Y6D6 1849 aa22.24■■□□□ 1.15
CDK4-207ENST00000550419 ZNF622Q969S3 477 aaKnown RBP eCLIP22.23■■□□□ 1.15
CDK4-207ENST00000550419 FAM89AQ96GI7 184 aa22.23■■□□□ 1.15
CDK4-207ENST00000550419 UTRNP46939 3433 aa22.23■■□□□ 1.15
CDK4-207ENST00000550419 ALDH1B1P30837 517 aa22.22■■□□□ 1.15
CDK4-207ENST00000550419 BEND3Q5T5X7 828 aa22.22■■□□□ 1.15
CDK4-207ENST00000550419 SYNE4Q8N205 404 aa22.22■■□□□ 1.15
CDK4-207ENST00000550419 F6X3S4 739 aa22.21■■□□□ 1.15
CDK4-207ENST00000550419 HCLS1P14317 486 aaPredicted RBP22.21■■□□□ 1.15
CDK4-207ENST00000550419 GCKRQ14397 625 aa22.21■■□□□ 1.15
CDK4-207ENST00000550419 CWF19L2Q2TBE0 894 aaKnown RBP22.21■■□□□ 1.15
CDK4-207ENST00000550419 BCL2L13Q9BXK5 485 aa22.21■■□□□ 1.15
CDK4-207ENST00000550419 WWC3Q9ULE0 1092 aa22.21■■□□□ 1.15
CDK4-207ENST00000550419 CDHR2Q9BYE9 1310 aa22.21■■□□□ 1.15
CDK4-207ENST00000550419 IRS4O14654 1257 aaPredicted RBP22.2■■□□□ 1.14
CDK4-207ENST00000550419 RPGRQ92834 1020 aaKnown RBP22.2■■□□□ 1.14
CDK4-207ENST00000550419 CRAMP1Q96RY5 1269 aa22.2■■□□□ 1.14
CDK4-207ENST00000550419 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
CDK4-207ENST00000550419 H7C1W4 665 aa22.19■■□□□ 1.14
CDK4-207ENST00000550419 SF3B3Q15393 1217 aaKnown RBP22.19■■□□□ 1.14
CDK4-207ENST00000550419 PRPF40BQ6NWY9 871 aaKnown RBP22.19■■□□□ 1.14
CDK4-207ENST00000550419 C3orf67Q6ZVT6 689 aa22.19■■□□□ 1.14
CDK4-207ENST00000550419 RBM17Q96I25 401 aaKnown RBP22.19■■□□□ 1.14
CDK4-207ENST00000550419 DDX60Q8IY21 1712 aaKnown RBP22.19■■□□□ 1.14
CDK4-207ENST00000550419 LAMB2P55268 1798 aa22.19■■□□□ 1.14
CDK4-207ENST00000550419 ALDH1L1O75891 902 aa22.18■■□□□ 1.14
CDK4-207ENST00000550419 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
CDK4-207ENST00000550419 SOGA3Q5TF21 947 aa22.17■■□□□ 1.14
CDK4-207ENST00000550419 C7orf43Q8WVR3 580 aa22.17■■□□□ 1.14
CDK4-207ENST00000550419 PDE8AO60658 829 aa22.16■■□□□ 1.14
CDK4-207ENST00000550419 RTL5Q5HYW3 569 aaPredicted RBP22.16■■□□□ 1.14
CDK4-207ENST00000550419 SRCIN1Q9C0H9 1055 aa22.16■■□□□ 1.14
CDK4-207ENST00000550419 SLC4A10Q6U841 1118 aa22.15■■□□□ 1.14
CDK4-207ENST00000550419 API5Q9BZZ5 524 aaKnown RBP22.15■■□□□ 1.14
CDK4-207ENST00000550419 NOB1Q9ULX3 412 aaKnown RBP22.15■■□□□ 1.14
CDK4-207ENST00000550419 SLX4Q8IY92 1834 aa22.15■■□□□ 1.14
CDK4-207ENST00000550419 CASP7P55210 303 aa22.14■■□□□ 1.13
CDK4-207ENST00000550419 ARHGAP27Q6ZUM4 889 aa22.14■■□□□ 1.13
CDK4-207ENST00000550419 UBE3BQ7Z3V4 1068 aa22.14■■□□□ 1.13
CDK4-207ENST00000550419 PLA2G12BQ9BX93 195 aa22.14■■□□□ 1.13
CDK4-207ENST00000550419 IPO8O15397 1037 aaKnown RBP22.13■■□□□ 1.13
CDK4-207ENST00000550419 C21orf2O43822 256 aa22.13■■□□□ 1.13
CDK4-207ENST00000550419 DDX46Q7L014 1031 aaKnown RBP22.13■■□□□ 1.13
CDK4-207ENST00000550419 CHD4Q14839 1912 aa22.12■■□□□ 1.13
CDK4-207ENST00000550419 GRM8O00222 908 aa22.12■■□□□ 1.13
CDK4-207ENST00000550419 BBOX1O75936 387 aa22.12■■□□□ 1.13
CDK4-207ENST00000550419 YY1P25490 414 aa22.12■■□□□ 1.13
CDK4-207ENST00000550419 GRIPAP1Q4V328 841 aa22.12■■□□□ 1.13
CDK4-207ENST00000550419 CC2D2BQ6DHV5 1058 aa22.12■■□□□ 1.13
CDK4-207ENST00000550419 UTYO14607 1347 aa22.11■■□□□ 1.13
CDK4-207ENST00000550419 ABCC4O15439 1325 aa22.11■■□□□ 1.13
CDK4-207ENST00000550419 BCAR3O75815 825 aa22.11■■□□□ 1.13
CDK4-207ENST00000550419 CCDC152Q4G0S7 254 aa22.11■■□□□ 1.13
CDK4-207ENST00000550419 TMC4Q7Z404 712 aa22.11■■□□□ 1.13
CDK4-207ENST00000550419 JARID2Q92833 1246 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms