RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 VPS18Q9P253 973 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CCDC89Q8N998 374 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CCDC63Q8NA47 563 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 SCAND2PQ9GZW5 306 aaPredicted RBP10.31□□□□□ -0.76
SCN8A-203ENST00000545061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CCDC69A6NI79 296 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 SH3BP5O60239 455 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CASTP20810 708 aaKnown RBP10.31□□□□□ -0.76
SCN8A-203ENST00000545061 VAV2P52735 878 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 RGS22Q8NE09 1264 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 FERMT2Q96AC1 680 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 OPTNQ96CV9 577 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 NKIRAS1Q9NYS0 192 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 ZEB2O60315 1214 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CTAGE8P0CG41 777 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 HS1BP3Q53T59 392 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CCDC102BQ68D86 513 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CTAGE4Q8IX94 777 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 GABPB2Q8TAK5 448 aaPredicted RBP10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CTAGE1Q96RT6 745 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 TRIM55Q9BYV6 548 aa10.31□□□□□ -0.76
SCN8A-203ENST00000545061 CLCN1P35523 988 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 FNBP4Q8N3X1 1017 aaPredicted RBP10.3□□□□□ -0.76
SCN8A-203ENST00000545061 RAB34Q9BZG1 259 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 SYCE3A1L190 88 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 FSD1Q9BTV5 496 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 CEP162Q5TB80 1403 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 PPP4R3AQ6IN85 833 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 OPHN1O60890 802 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 EIF2S2P20042 333 aaKnown RBP10.3□□□□□ -0.76
SCN8A-203ENST00000545061 LONP1P36776 959 aaKnown RBP10.3□□□□□ -0.76
SCN8A-203ENST00000545061 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
SCN8A-203ENST00000545061 TBC1D31Q96DN5 1066 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 CRBNQ96SW2 442 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 AKAP2Q9Y2D5 859 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 SESN3P58005 492 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 ARHGEF2Q92974 986 aaKnown RBP10.3□□□□□ -0.76
SCN8A-203ENST00000545061 ESRRGP62508 458 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 AFAP1L1Q8TED9 768 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 CCDC124Q96CT7 223 aaKnown RBP10.3□□□□□ -0.76
SCN8A-203ENST00000545061 ZHX3Q9H4I2 956 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 MTRF1LQ9UGC7 380 aaKnown RBP10.3□□□□□ -0.76
SCN8A-203ENST00000545061 PPP1R9AQ9ULJ8 1098 aa10.3□□□□□ -0.76
SCN8A-203ENST00000545061 MCM4P33991 863 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 CCDC159P0C7I6 412 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 UVSSAQ2YD98 709 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 FAM186BQ8IYM0 893 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 STX1AQ16623 288 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 HIP1RO75146 1068 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 KCNA4P22459 653 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 CCDC12Q8WUD4 166 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-203ENST00000545061 ZSCAN31Q96LW9 406 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-203ENST00000545061 TSGA10Q9BZW7 698 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 PHEXP78562 749 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 BTN2A1Q7KYR7 527 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCN8A-203ENST00000545061 RPAP2Q8IXW5 612 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-203ENST00000545061 GPR161Q8N6U8 529 aaKnown RBP10.29□□□□□ -0.76
SCN8A-203ENST00000545061 NEK1Q96PY6 1258 aa10.29□□□□□ -0.76
SCN8A-203ENST00000545061 HDAC9Q9UKV0 1011 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 CENPKQ9BS16 269 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 RRBP1Q9P2E9 1410 aaKnown RBP10.28□□□□□ -0.76
SCN8A-203ENST00000545061 GAS8O95995 478 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 KRT32Q14532 448 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 VEZTQ9HBM0 779 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 PAIP2BQ9ULR5 123 aaKnown RBP10.28□□□□□ -0.76
SCN8A-203ENST00000545061 PRPF4BQ13523 1007 aaKnown RBP10.28□□□□□ -0.76
SCN8A-203ENST00000545061 FLOT2Q14254 428 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 PPP1R12AO14974 1030 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-203ENST00000545061 HDAC1Q13547 482 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-203ENST00000545061 MSANTD4Q8NCY6 345 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 LMBR1Q8WVP7 490 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 EIF3DO15371 548 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCN8A-203ENST00000545061 GJC2Q5T442 439 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-203ENST00000545061 TMCO5AQ8N6Q1 288 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 NEK2P51955 445 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 MRFAP1Q9Y605 127 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 PEX19P40855 299 aa10.28□□□□□ -0.76
SCN8A-203ENST00000545061 CCT6BQ92526 530 aa10.27□□□□□ -0.76
SCN8A-203ENST00000545061 XPCQ01831 940 aaPredicted RBP10.27□□□□□ -0.76
SCN8A-203ENST00000545061 PABPN1Q86U42 306 aaKnown RBP eCLIP10.27□□□□□ -0.76
SCN8A-203ENST00000545061 SDCCAG3Q96C92 435 aa10.27□□□□□ -0.76
SCN8A-203ENST00000545061 NDUFAB1O14561 156 aa10.27□□□□□ -0.76
SCN8A-203ENST00000545061 ZFYVE1Q9HBF4 777 aa10.27□□□□□ -0.76
SCN8A-203ENST00000545061 TTC21AQ8NDW8 1320 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 TUBB2AQ13885 445 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.77
SCN8A-203ENST00000545061 TUBB2BQ9BVA1 445 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 KANK3Q6NY19 840 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 PALM2Q8IXS6 379 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 TBC1D5Q92609 795 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 PFDN4Q9NQP4 134 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 SCHIP1Q9P0W5 487 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-203ENST00000545061 C1orf141Q5JVX7 400 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 RASIP1Q5U651 963 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 ENAHQ8N8S7 591 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-203ENST00000545061 SELENOSQ9BQE4 189 aa10.27□□□□□ -0.77
SCN8A-203ENST00000545061 TRIM8Q9BZR9 551 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms