RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
LTBR-213ENST00000544454 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
LTBR-213ENST00000544454 NUP98P52948 1817 aa17.5■□□□□ 0.39
LTBR-213ENST00000544454 SRGNP10124 158 aa17.5■□□□□ 0.39
LTBR-213ENST00000544454 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
LTBR-213ENST00000544454 ALDH1L2Q3SY69 923 aa17.5■□□□□ 0.39
LTBR-213ENST00000544454 CCDC191Q8NCU4 936 aa17.5■□□□□ 0.39
LTBR-213ENST00000544454 MYD88Q99836 296 aa17.5■□□□□ 0.39
LTBR-213ENST00000544454 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
LTBR-213ENST00000544454 TTLL6Q8N841 843 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 SSH1Q8WYL5 1049 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 MASTLQ96GX5 879 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 BCS1LQ9Y276 419 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 ADCY9O60503 1353 aa17.49■□□□□ 0.39
LTBR-213ENST00000544454 SH3TC1Q8TE82 1336 aa17.48■□□□□ 0.39
LTBR-213ENST00000544454 ZNF622Q969S3 477 aaKnown RBP eCLIP17.48■□□□□ 0.39
LTBR-213ENST00000544454 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
LTBR-213ENST00000544454 NPR1P16066 1061 aa17.47■□□□□ 0.39
LTBR-213ENST00000544454 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
LTBR-213ENST00000544454 DNAAF4Q8WXU2 420 aa17.47■□□□□ 0.39
LTBR-213ENST00000544454 CNKSR1Q969H4 720 aa17.47■□□□□ 0.39
LTBR-213ENST00000544454 NLRP3Q96P20 1036 aa17.47■□□□□ 0.39
LTBR-213ENST00000544454 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
LTBR-213ENST00000544454 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
LTBR-213ENST00000544454 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
LTBR-213ENST00000544454 ZBTB38Q8NAP3 1195 aaPredicted RBP17.46■□□□□ 0.39
LTBR-213ENST00000544454 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
LTBR-213ENST00000544454 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
LTBR-213ENST00000544454 HSP90B1P14625 803 aaKnown RBP17.45■□□□□ 0.38
LTBR-213ENST00000544454 ALDH1B1P30837 517 aa17.45■□□□□ 0.38
LTBR-213ENST00000544454 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
LTBR-213ENST00000544454 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
LTBR-213ENST00000544454 LINS1Q8NG48 757 aa17.45■□□□□ 0.38
LTBR-213ENST00000544454 NEURL1BA8MQ27 555 aa17.44■□□□□ 0.38
LTBR-213ENST00000544454 PCCAP05165 728 aaPredicted RBP17.44■□□□□ 0.38
LTBR-213ENST00000544454 HCLS1P14317 486 aaPredicted RBP17.44■□□□□ 0.38
LTBR-213ENST00000544454 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
LTBR-213ENST00000544454 SMC4Q9NTJ3 1288 aa17.44■□□□□ 0.38
LTBR-213ENST00000544454 PTPRCP08575 1304 aa17.44■□□□□ 0.38
LTBR-213ENST00000544454 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
LTBR-213ENST00000544454 F6X3S4 739 aa17.43■□□□□ 0.38
LTBR-213ENST00000544454 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
LTBR-213ENST00000544454 IRS4O14654 1257 aaPredicted RBP17.42■□□□□ 0.38
LTBR-213ENST00000544454 CWF19L2Q2TBE0 894 aaKnown RBP17.42■□□□□ 0.38
LTBR-213ENST00000544454 BEND3Q5T5X7 828 aa17.42■□□□□ 0.38
LTBR-213ENST00000544454 C3orf67Q6ZVT6 689 aa17.42■□□□□ 0.38
LTBR-213ENST00000544454 RPGRQ92834 1020 aaKnown RBP17.42■□□□□ 0.38
LTBR-213ENST00000544454 RBM17Q96I25 401 aaKnown RBP17.42■□□□□ 0.38
LTBR-213ENST00000544454 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
LTBR-213ENST00000544454 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
LTBR-213ENST00000544454 ARFGEF2Q9Y6D5 1785 aa17.41■□□□□ 0.38
LTBR-213ENST00000544454 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
LTBR-213ENST00000544454 GCKRQ14397 625 aa17.41■□□□□ 0.38
LTBR-213ENST00000544454 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
LTBR-213ENST00000544454 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
LTBR-213ENST00000544454 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
LTBR-213ENST00000544454 CRAMP1Q96RY5 1269 aa17.41■□□□□ 0.38
LTBR-213ENST00000544454 ANKRD36CQ5JPF3 1778 aa17.4■□□□□ 0.38
LTBR-213ENST00000544454 H7C1W4 665 aa17.4■□□□□ 0.38
LTBR-213ENST00000544454 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
LTBR-213ENST00000544454 C7orf43Q8WVR3 580 aa17.4■□□□□ 0.38
LTBR-213ENST00000544454 ALDH1L1O75891 902 aa17.39■□□□□ 0.37
LTBR-213ENST00000544454 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
LTBR-213ENST00000544454 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
LTBR-213ENST00000544454 CDHR2Q9BYE9 1310 aa17.39■□□□□ 0.37
LTBR-213ENST00000544454 C21orf2O43822 256 aa17.38■□□□□ 0.37
LTBR-213ENST00000544454 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
LTBR-213ENST00000544454 ARHGAP45Q92619 1136 aa17.38■□□□□ 0.37
LTBR-213ENST00000544454 JARID2Q92833 1246 aaPredicted RBP17.38■□□□□ 0.37
LTBR-213ENST00000544454 SRCIN1Q9C0H9 1055 aa17.38■□□□□ 0.37
LTBR-213ENST00000544454 NOB1Q9ULX3 412 aaKnown RBP17.38■□□□□ 0.37
LTBR-213ENST00000544454 PDE8AO60658 829 aa17.37■□□□□ 0.37
LTBR-213ENST00000544454 BBOX1O75936 387 aa17.37■□□□□ 0.37
LTBR-213ENST00000544454 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
LTBR-213ENST00000544454 DLEC1Q9Y238 1755 aa17.36■□□□□ 0.37
LTBR-213ENST00000544454 CC2D2BQ6DHV5 1058 aa17.36■□□□□ 0.37
LTBR-213ENST00000544454 UBE3BQ7Z3V4 1068 aa17.36■□□□□ 0.37
LTBR-213ENST00000544454 API5Q9BZZ5 524 aaKnown RBP17.36■□□□□ 0.37
LTBR-213ENST00000544454 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
LTBR-213ENST00000544454 KIF16BQ96L93 1317 aa17.36■□□□□ 0.37
LTBR-213ENST00000544454 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
LTBR-213ENST00000544454 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
LTBR-213ENST00000544454 CASP7P55210 303 aa17.35■□□□□ 0.37
LTBR-213ENST00000544454 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
LTBR-213ENST00000544454 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
LTBR-213ENST00000544454 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
LTBR-213ENST00000544454 GRM8O00222 908 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 ABCC4O15439 1325 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 BCAR3O75815 825 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 YY1P25490 414 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 GRAPQ13588 217 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 GRIPAP1Q4V328 841 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 CCDC93Q567U6 631 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
LTBR-213ENST00000544454 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
LTBR-213ENST00000544454 C9orf78Q9NZ63 289 aaPredicted RBP17.34■□□□□ 0.37
LTBR-213ENST00000544454 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms