RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 ZNF213O14771 459 aa18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 RNF17Q9BXT8 1623 aaKnown RBP18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 USP19O94966 1318 aa18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 CCDC82Q8N4S0 544 aa18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 BABAM1Q9NWV8 329 aa18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 KDM5AP29375 1690 aaKnown RBP18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 CLTCQ00610 1675 aaKnown RBP18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 CYP7A1P22680 504 aa18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 HDAC9Q9UKV0 1011 aa18.62■□□□□ 0.57
PPFIA1-222ENST00000532504 H0YIN7 160 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 FEZ1Q99689 392 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 ATP7BP35670 1465 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 MCM2P49736 904 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 VEZTQ9HBM0 779 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 GJA3Q9Y6H8 435 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 PICALMQ13492 652 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 CCDC96Q2M329 555 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 ANKRD44Q8N8A2 993 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 ITGA6P23229 1130 aa18.61■□□□□ 0.57
PPFIA1-222ENST00000532504 TFCP2Q12800 502 aa18.6■□□□□ 0.57
PPFIA1-222ENST00000532504 KLHDC4Q8TBB5 520 aa18.6■□□□□ 0.57
PPFIA1-222ENST00000532504 UFL1O94874 794 aa18.6■□□□□ 0.57
PPFIA1-222ENST00000532504 PDE4CQ08493 712 aa18.6■□□□□ 0.57
PPFIA1-222ENST00000532504 HOXB7P09629 217 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 GIGYF1O75420 1035 aaPredicted RBP18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 CCDC191Q8NCU4 936 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 PDCP20941 246 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 DDX11Q96FC9 970 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 EYA3Q99504 573 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 GOLGA6L19H0YKK7 550 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 WDHD1O75717 1129 aaPredicted RBP18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 NOC3LQ8WTT2 800 aaKnown RBP18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 AXIN2Q9Y2T1 843 aa18.59■□□□□ 0.57
PPFIA1-222ENST00000532504 IQCA1Q86XH1 822 aa18.58■□□□□ 0.57
PPFIA1-222ENST00000532504 CEP152O94986 1710 aa18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 HLA-DOAP06340 250 aa18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 NAA16Q6N069 864 aaPredicted RBP18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 TTLL7Q6ZT98 887 aa18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 ALKQ9UM73 1620 aa18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 GOLGA6L3A6NEY3 463 aa18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 ANKRD2Q9GZV1 360 aa18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 HOOK1Q9UJC3 728 aaKnown RBP18.58■□□□□ 0.56
PPFIA1-222ENST00000532504 GSTO1P78417 241 aa18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 SYNMO15061 1565 aa18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 PDE8AO60658 829 aa18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 SLC9C2Q5TAH2 1124 aa18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 CDK5RAP3Q96JB5 506 aa18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 MSNP26038 577 aaKnown RBP18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 CRNKL1Q9BZJ0 848 aaKnown RBP18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
PPFIA1-222ENST00000532504 ANKARQ7Z5J8 1434 aa18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 CRKLP46109 303 aaKnown RBP18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 USPL1Q5W0Q7 1092 aa18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 BCS1LQ9Y276 419 aa18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 CEP85Q6P2H3 762 aa18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 PCMTD1Q96MG8 357 aaPredicted RBP18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 CABP5Q9NP86 173 aa18.56■□□□□ 0.56
PPFIA1-222ENST00000532504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.561e-6■■■□□ 18.3
PPFIA1-222ENST00000532504 IFIT3O14879 490 aaKnown RBP18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 TMEM132AQ24JP5 1023 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 TSPY2A6NKD2 308 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 STK38Q15208 465 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 ZGPATQ8N5A5 531 aaKnown RBP18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 KDM4FA0A1W2PPD8 638 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 TAF5LO75529 589 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 LARP1BQ659C4 914 aaKnown RBP18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 SDF4Q9BRK5 362 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 RNF41Q9H4P4 317 aaPredicted RBP18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 ABCA6Q8N139 1617 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 FIBPO43427 364 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 CDKL5O76039 1030 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 ZNF76P36508 570 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
PPFIA1-222ENST00000532504 TIMM10P62072 90 aa18.54■□□□□ 0.56
PPFIA1-222ENST00000532504 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
PPFIA1-222ENST00000532504 TPM2P07951 284 aa18.54■□□□□ 0.56
PPFIA1-222ENST00000532504 MIGA1Q8NAN2 632 aa18.54■□□□□ 0.56
PPFIA1-222ENST00000532504 GPR162Q16538 588 aa18.54■□□□□ 0.56
PPFIA1-222ENST00000532504 DPP8Q6V1X1 898 aaPredicted RBP18.54■□□□□ 0.56
PPFIA1-222ENST00000532504 LARGE2Q8N3Y3 721 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 CTCFLQ8NI51 663 aaPredicted RBP18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 ZBTB1Q9Y2K1 713 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 CHMP4BP1P59074 171 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 SLC4A4Q9Y6R1 1079 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 NBPF7P0C2Y1 421 aaPredicted RBP18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 UNC13BO14795 1591 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 ARHGEF40Q8TER5 1519 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 RTL1A6NKG5 1358 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 PDE4BQ07343 736 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 GCKRQ14397 625 aa18.53■□□□□ 0.56
PPFIA1-222ENST00000532504 GGA1Q9UJY5 639 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms