RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 COL4A5P29400 1685 aa19.57■□□□□ 0.72
CSTF3-204ENST00000524556 HOXA10P31260 410 aaPredicted RBP19.57■□□□□ 0.72
CSTF3-204ENST00000524556 NGEFQ8N5V2 710 aa19.57■□□□□ 0.72
CSTF3-204ENST00000524556 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
CSTF3-204ENST00000524556 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
CSTF3-204ENST00000524556 LTBP1Q14766 1721 aa19.56■□□□□ 0.72
CSTF3-204ENST00000524556 MAP3K15Q6ZN16 1313 aa19.56■□□□□ 0.72
CSTF3-204ENST00000524556 HSPA8P11142 646 aaKnown RBP19.56■□□□□ 0.72
CSTF3-204ENST00000524556 GRIPAP1Q4V328 841 aa19.56■□□□□ 0.72
CSTF3-204ENST00000524556 RPGRQ92834 1020 aaKnown RBP19.56■□□□□ 0.72
CSTF3-204ENST00000524556 ABT1Q9ULW3 272 aaKnown RBP19.56■□□□□ 0.72
CSTF3-204ENST00000524556 KDM3BQ7LBC6 1761 aa19.56■□□□□ 0.72
CSTF3-204ENST00000524556 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
CSTF3-204ENST00000524556 MAP2K1Q02750 393 aaPredicted RBP19.55■□□□□ 0.72
CSTF3-204ENST00000524556 RIC1Q4ADV7 1423 aa19.55■□□□□ 0.72
CSTF3-204ENST00000524556 TTLL7Q6ZT98 887 aa19.55■□□□□ 0.72
CSTF3-204ENST00000524556 DDX21Q9NR30 783 aaKnown RBP eCLIP19.55■□□□□ 0.72
CSTF3-204ENST00000524556 KIF6Q6ZMV9 814 aa19.54■□□□□ 0.72
CSTF3-204ENST00000524556 PNISRQ8TF01 805 aaKnown RBP19.54■□□□□ 0.72
CSTF3-204ENST00000524556 RRP7AQ9Y3A4 280 aaKnown RBP19.54■□□□□ 0.72
CSTF3-204ENST00000524556 IBTKQ9P2D0 1353 aaPredicted RBP19.54■□□□□ 0.72
CSTF3-204ENST00000524556 TRPM7Q96QT4 1865 aa19.54■□□□□ 0.72
CSTF3-204ENST00000524556 EPS15P42566 896 aa19.53■□□□□ 0.72
CSTF3-204ENST00000524556 SCNN1DP51172 638 aa19.53■□□□□ 0.72
CSTF3-204ENST00000524556 LARGE2Q8N3Y3 721 aa19.53■□□□□ 0.72
CSTF3-204ENST00000524556 RBM17Q96I25 401 aaKnown RBP19.53■□□□□ 0.72
CSTF3-204ENST00000524556 CRAMP1Q96RY5 1269 aa19.53■□□□□ 0.72
CSTF3-204ENST00000524556 UBN2Q6ZU65 1347 aa19.52■□□□□ 0.72
CSTF3-204ENST00000524556 GPTP24298 496 aa19.52■□□□□ 0.72
CSTF3-204ENST00000524556 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.72
CSTF3-204ENST00000524556 SUSD4Q5VX71 490 aa19.52■□□□□ 0.72
CSTF3-204ENST00000524556 PPEF1O14829 653 aaPredicted RBP19.51■□□□□ 0.71
CSTF3-204ENST00000524556 MYL6BP14649 208 aa19.51■□□□□ 0.71
CSTF3-204ENST00000524556 FMR1Q06787 632 aaKnown RBP eCLIP19.51■□□□□ 0.71
CSTF3-204ENST00000524556 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
CSTF3-204ENST00000524556 ZNF34Q8IZ26 560 aa19.51■□□□□ 0.71
CSTF3-204ENST00000524556 ZBTB3Q9H5J0 574 aa19.51■□□□□ 0.71
CSTF3-204ENST00000524556 SLC51AQ86UW1 340 aa19.5■□□□□ 0.71
CSTF3-204ENST00000524556 ABHD8Q96I13 439 aa19.5■□□□□ 0.71
CSTF3-204ENST00000524556 CAPNS2Q96L46 248 aa19.5■□□□□ 0.71
CSTF3-204ENST00000524556 THSD7BQ9C0I4 1608 aa19.5■□□□□ 0.71
CSTF3-204ENST00000524556 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
CSTF3-204ENST00000524556 NTSR2O95665 410 aa19.49■□□□□ 0.71
CSTF3-204ENST00000524556 NEFMP07197 916 aa19.49■□□□□ 0.71
CSTF3-204ENST00000524556 ECE1P42892 770 aa19.49■□□□□ 0.71
CSTF3-204ENST00000524556 CST9Q5W186 159 aa19.49■□□□□ 0.71
CSTF3-204ENST00000524556 C3orf67Q6ZVT6 689 aa19.49■□□□□ 0.71
CSTF3-204ENST00000524556 NIM1KQ8IY84 436 aa19.49■□□□□ 0.71
CSTF3-204ENST00000524556 GIGYF2Q6Y7W6 1299 aaKnown RBP19.48■□□□□ 0.71
CSTF3-204ENST00000524556 TRAF5O00463 557 aa19.47■□□□□ 0.71
CSTF3-204ENST00000524556 PPIP5K2O43314 1243 aa19.47■□□□□ 0.71
CSTF3-204ENST00000524556 CYP4F22Q6NT55 531 aa19.47■□□□□ 0.71
CSTF3-204ENST00000524556 PAXIP1Q6ZW49 1069 aaPredicted RBP19.47■□□□□ 0.71
CSTF3-204ENST00000524556 PPP1R42Q7Z4L9 355 aa19.47■□□□□ 0.71
CSTF3-204ENST00000524556 GPR101Q96P66 508 aaPredicted RBP19.47■□□□□ 0.71
CSTF3-204ENST00000524556 PLEKHF1Q96S99 279 aa19.47■□□□□ 0.71
CSTF3-204ENST00000524556 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
CSTF3-204ENST00000524556 NFE2L2Q16236 605 aa19.46■□□□□ 0.71
CSTF3-204ENST00000524556 PARP10Q53GL7 1025 aa19.46■□□□□ 0.71
CSTF3-204ENST00000524556 NLRP3Q96P20 1036 aa19.46■□□□□ 0.71
CSTF3-204ENST00000524556 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
CSTF3-204ENST00000524556 BEGAINQ9BUH8 593 aa19.46■□□□□ 0.71
CSTF3-204ENST00000524556 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
CSTF3-204ENST00000524556 ATP6V0A2Q9Y487 856 aa19.46■□□□□ 0.71
CSTF3-204ENST00000524556 TLL2Q9Y6L7 1015 aa19.46■□□□□ 0.71
CSTF3-204ENST00000524556 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
CSTF3-204ENST00000524556 AOC3Q16853 763 aa19.45■□□□□ 0.7
CSTF3-204ENST00000524556 SLC10A5Q5PT55 438 aa19.45■□□□□ 0.7
CSTF3-204ENST00000524556 ADARB2Q9NS39 739 aaKnown RBP19.45■□□□□ 0.7
CSTF3-204ENST00000524556 GPRC5DQ9NZD1 345 aa19.45■□□□□ 0.7
CSTF3-204ENST00000524556 GRM1Q13255 1194 aa19.44■□□□□ 0.7
CSTF3-204ENST00000524556 MAP2K2P36507 400 aa19.43■□□□□ 0.7
CSTF3-204ENST00000524556 CXCL9Q07325 125 aa19.43■□□□□ 0.7
CSTF3-204ENST00000524556 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
CSTF3-204ENST00000524556 UTP14AQ9BVJ6 771 aaKnown RBP19.43■□□□□ 0.7
CSTF3-204ENST00000524556 RTFDC1Q9BY42 306 aaPredicted RBP19.43■□□□□ 0.7
CSTF3-204ENST00000524556 ZNRF3Q9ULT6 936 aa19.43■□□□□ 0.7
CSTF3-204ENST00000524556 LRP10Q7Z4F1 713 aa19.42■□□□□ 0.7
CSTF3-204ENST00000524556 ABCC4O15439 1325 aa19.42■□□□□ 0.7
CSTF3-204ENST00000524556 LAMB2P55268 1798 aa19.42■□□□□ 0.7
CSTF3-204ENST00000524556 AOC2O75106 756 aa19.41■□□□□ 0.7
CSTF3-204ENST00000524556 BBOX1O75936 387 aa19.41■□□□□ 0.7
CSTF3-204ENST00000524556 GMPSP49915 693 aaPredicted RBP19.41■□□□□ 0.7
CSTF3-204ENST00000524556 PDIA6Q15084 440 aa19.41■□□□□ 0.7
CSTF3-204ENST00000524556 PGAP2Q9UHJ9 254 aa19.41■□□□□ 0.7
CSTF3-204ENST00000524556 ANKRD36CQ5JPF3 1778 aa19.41■□□□□ 0.7
CSTF3-204ENST00000524556 CELF2O95319 508 aaKnown RBP19.4■□□□□ 0.7
CSTF3-204ENST00000524556 FAM161AQ3B820 660 aa19.4■□□□□ 0.7
CSTF3-204ENST00000524556 SAPCD2Q86UD0 394 aa19.4■□□□□ 0.7
CSTF3-204ENST00000524556 SP8Q8IXZ3 490 aa19.4■□□□□ 0.7
CSTF3-204ENST00000524556 PNNQ9H307 717 aaKnown RBP19.4■□□□□ 0.7
CSTF3-204ENST00000524556 CCDC85CA6NKD9 419 aa19.39■□□□□ 0.69
CSTF3-204ENST00000524556 DPP8Q6V1X1 898 aaPredicted RBP19.39■□□□□ 0.69
CSTF3-204ENST00000524556 GLIS2Q9BZE0 524 aaPredicted RBP19.39■□□□□ 0.69
CSTF3-204ENST00000524556 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
CSTF3-204ENST00000524556 EIF2S2P20042 333 aaKnown RBP19.38■□□□□ 0.69
CSTF3-204ENST00000524556 KIAA2012Q0VF49 1180 aa19.38■□□□□ 0.69
CSTF3-204ENST00000524556 PROSER3Q2NL68 480 aa19.38■□□□□ 0.69
CSTF3-204ENST00000524556 CIAPIN1Q6FI81 312 aa19.38■□□□□ 0.69
CSTF3-204ENST00000524556 MPNDQ8N594 471 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms