RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 EIF4A1P60842 406 aaKnown RBP30.18■■■□□ 2.42
PVT1-218ENST00000523328 CC2D2BQ6DHV5 1058 aa30.18■■■□□ 2.42
PVT1-218ENST00000523328 PNISRQ8TF01 805 aaKnown RBP30.18■■■□□ 2.42
PVT1-218ENST00000523328 JDP2Q8WYK2 163 aa30.18■■■□□ 2.42
PVT1-218ENST00000523328 WBP1LQ9NX94 342 aa30.18■■■□□ 2.42
PVT1-218ENST00000523328 UBN2Q6ZU65 1347 aa30.18■■■□□ 2.42
PVT1-218ENST00000523328 RASSF10A6NK89 507 aa30.17■■■□□ 2.42
PVT1-218ENST00000523328 HOXA10P31260 410 aaPredicted RBP30.17■■■□□ 2.42
PVT1-218ENST00000523328 AIDAQ96BJ3 306 aa30.17■■■□□ 2.42
PVT1-218ENST00000523328 RRP7AQ9Y3A4 280 aaKnown RBP30.16■■■□□ 2.42
PVT1-218ENST00000523328 RPGRQ92834 1020 aaKnown RBP30.15■■■□□ 2.42
PVT1-218ENST00000523328 GPTP24298 496 aa30.14■■■□□ 2.42
PVT1-218ENST00000523328 DEFB115Q30KQ5 88 aa30.14■■■□□ 2.42
PVT1-218ENST00000523328 SUSD4Q5VX71 490 aa30.14■■■□□ 2.42
PVT1-218ENST00000523328 KIF6Q6ZMV9 814 aa30.14■■■□□ 2.42
PVT1-218ENST00000523328 SLC51AQ86UW1 340 aa30.14■■■□□ 2.42
PVT1-218ENST00000523328 EIF6P56537 245 aaKnown RBP30.13■■■□□ 2.41
PVT1-218ENST00000523328 PLEKHF1Q96S99 279 aa30.13■■■□□ 2.41
PVT1-218ENST00000523328 ZBTB3Q9H5J0 574 aa30.13■■■□□ 2.41
PVT1-218ENST00000523328 GJA3Q9Y6H8 435 aa30.13■■■□□ 2.41
PVT1-218ENST00000523328 MYL6BP14649 208 aa30.12■■■□□ 2.41
PVT1-218ENST00000523328 ZNF34Q8IZ26 560 aa30.12■■■□□ 2.41
PVT1-218ENST00000523328 THUMPD2Q9BTF0 503 aaKnown RBP30.12■■■□□ 2.41
PVT1-218ENST00000523328 NEFMP07197 916 aa30.11■■■□□ 2.41
PVT1-218ENST00000523328 SCNN1DP51172 638 aa30.11■■■□□ 2.41
PVT1-218ENST00000523328 GRIPAP1Q4V328 841 aa30.11■■■□□ 2.41
PVT1-218ENST00000523328 CRAMP1Q96RY5 1269 aa30.11■■■□□ 2.41
PVT1-218ENST00000523328 NTSR2O95665 410 aa30.1■■■□□ 2.41
PVT1-218ENST00000523328 LBX1P52954 281 aa30.1■■■□□ 2.41
PVT1-218ENST00000523328 DDX21Q9NR30 783 aaKnown RBP eCLIP30.1■■■□□ 2.41
PVT1-218ENST00000523328 EPS15P42566 896 aa30.09■■■□□ 2.41
PVT1-218ENST00000523328 NFE2L2Q16236 605 aa30.09■■■□□ 2.41
PVT1-218ENST00000523328 C3orf67Q6ZVT6 689 aa30.09■■■□□ 2.41
PVT1-218ENST00000523328 LARGE2Q8N3Y3 721 aa30.09■■■□□ 2.41
PVT1-218ENST00000523328 RBM17Q96I25 401 aaKnown RBP30.09■■■□□ 2.41
PVT1-218ENST00000523328 WDR33Q9C0J8 1336 aaKnown RBP30.09■■■□□ 2.41
PVT1-218ENST00000523328 PPEF1O14829 653 aaPredicted RBP30.08■■■□□ 2.41
PVT1-218ENST00000523328 LMOD1P29536 600 aaPredicted RBP30.08■■■□□ 2.41
PVT1-218ENST00000523328 GIGYF2Q6Y7W6 1299 aaKnown RBP30.08■■■□□ 2.41
PVT1-218ENST00000523328 TRPM7Q96QT4 1865 aa30.08■■■□□ 2.41
PVT1-218ENST00000523328 ABT1Q9ULW3 272 aaKnown RBP30.07■■■□□ 2.4
PVT1-218ENST00000523328 THSD7BQ9C0I4 1608 aa30.07■■■□□ 2.4
PVT1-218ENST00000523328 ERBB4Q15303 1308 aa30.06■■■□□ 2.4
PVT1-218ENST00000523328 HSPA8P11142 646 aaKnown RBP30.06■■■□□ 2.4
PVT1-218ENST00000523328 FMR1Q06787 632 aaKnown RBP eCLIP30.06■■■□□ 2.4
PVT1-218ENST00000523328 TCERG1O14776 1098 aaKnown RBP30.05■■■□□ 2.4
PVT1-218ENST00000523328 LRP10Q7Z4F1 713 aa30.05■■■□□ 2.4
PVT1-218ENST00000523328 MAP2K1Q02750 393 aaPredicted RBP30.04■■■□□ 2.4
PVT1-218ENST00000523328 USP50Q70EL3 339 aaPredicted RBP30.03■■■□□ 2.4
PVT1-218ENST00000523328 PPP1R42Q7Z4L9 355 aa30.03■■■□□ 2.4
PVT1-218ENST00000523328 NIM1KQ8IY84 436 aa30.03■■■□□ 2.4
PVT1-218ENST00000523328 PARP10Q53GL7 1025 aa30.02■■■□□ 2.4
PVT1-218ENST00000523328 LAMB2P55268 1798 aa30.02■■■□□ 2.4
PVT1-218ENST00000523328 PPIP5K2O43314 1243 aa30.01■■■□□ 2.39
PVT1-218ENST00000523328 PDIA6Q15084 440 aa30.01■■■□□ 2.39
PVT1-218ENST00000523328 NLRP3Q96P20 1036 aa30.01■■■□□ 2.39
PVT1-218ENST00000523328 AOC3Q16853 763 aa30■■■□□ 2.39
PVT1-218ENST00000523328 SLC10A5Q5PT55 438 aa30■■■□□ 2.39
PVT1-218ENST00000523328 ATP6V0A2Q9Y487 856 aa30■■■□□ 2.39
PVT1-218ENST00000523328 ANKRD36CQ5JPF3 1778 aa30■■■□□ 2.39
PVT1-218ENST00000523328 CST9Q5W186 159 aa29.99■■■□□ 2.39
PVT1-218ENST00000523328 CAPNS2Q96L46 248 aa29.99■■■□□ 2.39
PVT1-218ENST00000523328 VPS33BQ9H267 617 aa29.99■■■□□ 2.39
PVT1-218ENST00000523328 TRAF5O00463 557 aa29.98■■■□□ 2.39
PVT1-218ENST00000523328 UTP14AQ9BVJ6 771 aaKnown RBP29.98■■■□□ 2.39
PVT1-218ENST00000523328 TSPYL4Q9UJ04 414 aa29.98■■■□□ 2.39
PVT1-218ENST00000523328 ABCC4O15439 1325 aa29.97■■■□□ 2.39
PVT1-218ENST00000523328 MAPK8IP3Q9UPT6 1336 aa29.97■■■□□ 2.39
PVT1-218ENST00000523328 GPRC5DQ9NZD1 345 aa29.97■■■□□ 2.39
PVT1-218ENST00000523328 CXCL9Q07325 125 aa29.96■■■□□ 2.39
PVT1-218ENST00000523328 PROSER3Q2NL68 480 aa29.96■■■□□ 2.39
PVT1-218ENST00000523328 RTFDC1Q9BY42 306 aaPredicted RBP29.96■■■□□ 2.39
PVT1-218ENST00000523328 PNNQ9H307 717 aaKnown RBP29.96■■■□□ 2.39
PVT1-218ENST00000523328 EIF2S2P20042 333 aaKnown RBP29.95■■■□□ 2.39
PVT1-218ENST00000523328 ECE1P42892 770 aa29.95■■■□□ 2.39
PVT1-218ENST00000523328 CYP4F22Q6NT55 531 aa29.95■■■□□ 2.39
PVT1-218ENST00000523328 ADARB2Q9NS39 739 aaKnown RBP29.95■■■□□ 2.39
PVT1-218ENST00000523328 TLL2Q9Y6L7 1015 aa29.95■■■□□ 2.39
PVT1-218ENST00000523328 ANXA1P04083 346 aa29.94■■■□□ 2.38
PVT1-218ENST00000523328 PAXIP1Q6ZW49 1069 aaPredicted RBP29.94■■■□□ 2.38
PVT1-218ENST00000523328 ABHD8Q96I13 439 aa29.94■■■□□ 2.38
PVT1-218ENST00000523328 TMX4Q9H1E5 349 aaPredicted RBP29.94■■■□□ 2.38
PVT1-218ENST00000523328 ZNRF3Q9ULT6 936 aa29.94■■■□□ 2.38
PVT1-218ENST00000523328 GPR101Q96P66 508 aaPredicted RBP29.93■■■□□ 2.38
PVT1-218ENST00000523328 TAF1P21675 1872 aa29.92■■■□□ 2.38
PVT1-218ENST00000523328 SUPT20HQ8NEM7 779 aa29.92■■■□□ 2.38
PVT1-218ENST00000523328 SP8Q8IXZ3 490 aa29.91■■■□□ 2.38
PVT1-218ENST00000523328 BBOX1O75936 387 aa29.9■■■□□ 2.38
PVT1-218ENST00000523328 GMPSP49915 693 aaPredicted RBP29.9■■■□□ 2.38
PVT1-218ENST00000523328 GRM1Q13255 1194 aa29.9■■■□□ 2.38
PVT1-218ENST00000523328 RIPK4P57078 832 aa29.89■■■□□ 2.38
PVT1-218ENST00000523328 KIAA2012Q0VF49 1180 aa29.89■■■□□ 2.38
PVT1-218ENST00000523328 DPP8Q6V1X1 898 aaPredicted RBP29.89■■■□□ 2.38
PVT1-218ENST00000523328 NLRP10Q86W26 655 aa29.89■■■□□ 2.38
PVT1-218ENST00000523328 BABAM1Q9NWV8 329 aa29.89■■■□□ 2.38
PVT1-218ENST00000523328 HCLS1P14317 486 aaPredicted RBP29.88■■■□□ 2.37
PVT1-218ENST00000523328 COPS6Q7L5N1 327 aa29.88■■■□□ 2.37
PVT1-218ENST00000523328 MPNDQ8N594 471 aa29.88■■■□□ 2.37
PVT1-218ENST00000523328 BEGAINQ9BUH8 593 aa29.88■■■□□ 2.37
PVT1-218ENST00000523328 PGAP2Q9UHJ9 254 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms