RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 COG3Q96JB2 828 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 USP26Q9BXU7 913 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 SLC12A5Q9H2X9 1139 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 KDM4AO75164 1064 aa8.46□□□□□ -1.05
EPHA3-203ENST00000494014 CCDC183Q5T5S1 534 aa8.46□□□□□ -1.05
EPHA3-203ENST00000494014 INTS3Q68E01 1043 aaKnown RBP8.46□□□□□ -1.05
EPHA3-203ENST00000494014 CFAP53Q96M91 514 aa8.46□□□□□ -1.05
EPHA3-203ENST00000494014 EFCC1Q9HA90 598 aa8.46□□□□□ -1.05
EPHA3-203ENST00000494014 PAXBP1Q9Y5B6 917 aa8.46□□□□□ -1.05
EPHA3-203ENST00000494014 IL16Q14005 1332 aa8.46□□□□□ -1.06
EPHA3-203ENST00000494014 C17orf53Q8N3J3 647 aaPredicted RBP8.46□□□□□ -1.06
EPHA3-203ENST00000494014 ZGPATQ8N5A5 531 aaKnown RBP8.46□□□□□ -1.06
EPHA3-203ENST00000494014 SSH1Q8WYL5 1049 aa8.46□□□□□ -1.06
EPHA3-203ENST00000494014 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
EPHA3-203ENST00000494014 ZNF397Q8NF99 534 aaPredicted RBP8.45□□□□□ -1.06
EPHA3-203ENST00000494014 NOB1Q9ULX3 412 aaKnown RBP8.45□□□□□ -1.06
EPHA3-203ENST00000494014 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
EPHA3-203ENST00000494014 ALDH1L2Q3SY69 923 aa8.45□□□□□ -1.06
EPHA3-203ENST00000494014 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
EPHA3-203ENST00000494014 CAPN2P17655 700 aa8.45□□□□□ -1.06
EPHA3-203ENST00000494014 EXOSC9Q06265 439 aaKnown RBP8.45□□□□□ -1.06
EPHA3-203ENST00000494014 FAM53CQ9NYF3 392 aa8.45□□□□□ -1.06
EPHA3-203ENST00000494014 PCDH11XQ9BZA7 1347 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 PCDH11YQ9BZA8 1340 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 TRIM6-TRIM34B2RNG4 842 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 FYB1O15117 783 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 ZNF428Q96B54 188 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 INTS4Q96HW7 963 aaKnown RBP8.44□□□□□ -1.06
EPHA3-203ENST00000494014 ZFP91Q96JP5 570 aaPredicted RBP8.44□□□□□ -1.06
EPHA3-203ENST00000494014 TRIM34Q9BYJ4 488 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 TMEM87AQ8NBN3 555 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 FLAD1Q8NFF5 587 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 TAOK2Q9UL54 1235 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 PYCARDQ9ULZ3 195 aa8.44□□□□□ -1.06
EPHA3-203ENST00000494014 DCAF8L1A6NGE4 600 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 REC8O95072 547 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
EPHA3-203ENST00000494014 SLFNL1Q499Z3 407 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 MORC1Q86VD1 984 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 CCDC112Q8NEF3 446 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 KCNF1Q9H3M0 494 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 MRC1P22897 1456 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 MX1P20591 662 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 RNF20Q5VTR2 975 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 CARD14Q9BXL6 1004 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 PNPLA7Q6ZV29 1317 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 SCN11AQ9UI33 1791 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 CUL4AQ13619 759 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 CTR9Q6PD62 1173 aa8.43□□□□□ -1.06
EPHA3-203ENST00000494014 ZCRB1Q8TBF4 217 aaKnown RBP8.43□□□□□ -1.06
EPHA3-203ENST00000494014 BRCA1P38398 1863 aaKnown RBP8.42□□□□□ -1.06
EPHA3-203ENST00000494014 TTC22Q5TAA0 569 aa8.42□□□□□ -1.06
EPHA3-203ENST00000494014 MPNDQ8N594 471 aa8.42□□□□□ -1.06
EPHA3-203ENST00000494014 GEMIN8Q9NWZ8 242 aaKnown RBP8.42□□□□□ -1.06
EPHA3-203ENST00000494014 NLRP2Q9NX02 1062 aa8.42□□□□□ -1.06
EPHA3-203ENST00000494014 FEZ2Q9UHY8 353 aaPredicted RBP8.42□□□□□ -1.06
EPHA3-203ENST00000494014 KDRP35968 1356 aa8.42□□□□□ -1.06
EPHA3-203ENST00000494014 HCLS1P14317 486 aaPredicted RBP8.42□□□□□ -1.06
EPHA3-203ENST00000494014 GSPT1P15170 499 aaKnown RBP8.42□□□□□ -1.06
EPHA3-203ENST00000494014 CYP2C19P33261 490 aa8.42□□□□□ -1.06
EPHA3-203ENST00000494014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.42□□□□□ -1.06
EPHA3-203ENST00000494014 WDR33Q9C0J8 1336 aaKnown RBP8.41□□□□□ -1.06
EPHA3-203ENST00000494014 ZNF827Q17R98 1081 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 TSR2Q969E8 191 aaKnown RBP8.41□□□□□ -1.06
EPHA3-203ENST00000494014 LRRC4BQ9NT99 713 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 ARHGAP45Q92619 1136 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 SMARCC1Q92922 1105 aaPredicted RBP8.41□□□□□ -1.06
EPHA3-203ENST00000494014 TMX3Q96JJ7 454 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 ADCY9O60503 1353 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 UBR2Q8IWV8 1755 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 ARFGEF1Q9Y6D6 1849 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 TCHHQ07283 1943 aa8.41□□□□□ -1.06
EPHA3-203ENST00000494014 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
EPHA3-203ENST00000494014 TNNT1P13805 278 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 PLEKHM2Q8IWE5 1019 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 KIF1BPQ96EK5 621 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 PPP1R1BQ9UD71 204 aaPredicted RBP8.4□□□□□ -1.06
EPHA3-203ENST00000494014 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.4□□□□□ -1.06
EPHA3-203ENST00000494014 TJP1Q07157 1748 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 NRXN2Q9P2S2 1712 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 ERICH4A6NGS2 130 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 TNNT3P45378 269 aaPredicted RBP8.4□□□□□ -1.06
EPHA3-203ENST00000494014 USP48Q86UV5 1035 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
EPHA3-203ENST00000494014 SYT17Q9BSW7 474 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 CHMP4AQ9BY43 222 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 C4AP0C0L4 1744 aa8.4□□□□□ -1.06
EPHA3-203ENST00000494014 UBE2HP62256 183 aa8.4□□□□□ -1.07
EPHA3-203ENST00000494014 MUM1L1Q5H9M0 696 aa8.4□□□□□ -1.07
EPHA3-203ENST00000494014 FUCA2Q9BTY2 467 aa8.4□□□□□ -1.07
EPHA3-203ENST00000494014 DLEC1Q9Y238 1755 aa8.4□□□□□ -1.07
EPHA3-203ENST00000494014 YY1P25490 414 aa8.39□□□□□ -1.07
EPHA3-203ENST00000494014 MMP14P50281 582 aa8.39□□□□□ -1.07
EPHA3-203ENST00000494014 BMS1Q14692 1282 aaKnown RBP8.39□□□□□ -1.07
EPHA3-203ENST00000494014 HTATSF1O43719 755 aaKnown RBP8.39□□□□□ -1.07
EPHA3-203ENST00000494014 GADD45BO75293 160 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-203ENST00000494014 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-203ENST00000494014 FOXD4L5Q5VV16 416 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-203ENST00000494014 NBPF6Q5VWK0 638 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms