RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FKBP5Q13451 457 aaPredicted RBP26.73■■□□□ 1.87
SEC13-217ENST00000482647 MYD88Q99836 296 aa26.73■■□□□ 1.87
SEC13-217ENST00000482647 METTL22Q9BUU2 404 aaPredicted RBP26.73■■□□□ 1.87
SEC13-217ENST00000482647 TRMT112Q9UI30 125 aaKnown RBP26.72■■□□□ 1.87
SEC13-217ENST00000482647 ZBED9Q6R2W3 1325 aa26.71■■□□□ 1.87
SEC13-217ENST00000482647 KLRG2A4D1S0 409 aaPredicted RBP26.71■■□□□ 1.87
SEC13-217ENST00000482647 ZNF622Q969S3 477 aaKnown RBP eCLIP26.71■■□□□ 1.87
SEC13-217ENST00000482647 SRGNP10124 158 aa26.7■■□□□ 1.86
SEC13-217ENST00000482647 NEXNQ0ZGT2 675 aa26.7■■□□□ 1.86
SEC13-217ENST00000482647 SLC10A5Q5PT55 438 aa26.7■■□□□ 1.86
SEC13-217ENST00000482647 SH3TC1Q8TE82 1336 aa26.69■■□□□ 1.86
SEC13-217ENST00000482647 TTLL6Q8N841 843 aa26.69■■□□□ 1.86
SEC13-217ENST00000482647 MASTLQ96GX5 879 aa26.69■■□□□ 1.86
SEC13-217ENST00000482647 ADCY9O60503 1353 aa26.69■■□□□ 1.86
SEC13-217ENST00000482647 KIAA1551Q9HCM1 1747 aa26.68■■□□□ 1.86
SEC13-217ENST00000482647 STYK1Q6J9G0 422 aa26.68■■□□□ 1.86
SEC13-217ENST00000482647 CCDC191Q8NCU4 936 aa26.68■■□□□ 1.86
SEC13-217ENST00000482647 N4BP2Q86UW6 1770 aaPredicted RBP26.68■■□□□ 1.86
SEC13-217ENST00000482647 ABCC12Q96J65 1359 aa26.68■■□□□ 1.86
SEC13-217ENST00000482647 NPR1P16066 1061 aa26.67■■□□□ 1.86
SEC13-217ENST00000482647 ALDH1L2Q3SY69 923 aa26.67■■□□□ 1.86
SEC13-217ENST00000482647 MRPL50Q8N5N7 158 aaKnown RBP26.67■■□□□ 1.86
SEC13-217ENST00000482647 SSH1Q8WYL5 1049 aa26.67■■□□□ 1.86
SEC13-217ENST00000482647 CNKSR1Q969H4 720 aa26.67■■□□□ 1.86
SEC13-217ENST00000482647 NLRP3Q96P20 1036 aa26.67■■□□□ 1.86
SEC13-217ENST00000482647 CWC25Q9NXE8 425 aaPredicted RBP26.67■■□□□ 1.86
SEC13-217ENST00000482647 DNAAF4Q8WXU2 420 aa26.66■■□□□ 1.86
SEC13-217ENST00000482647 CRY2Q49AN0 593 aa26.65■■□□□ 1.86
SEC13-217ENST00000482647 FAM89AQ96GI7 184 aa26.65■■□□□ 1.86
SEC13-217ENST00000482647 RIC1Q4ADV7 1423 aa26.65■■□□□ 1.86
SEC13-217ENST00000482647 SYNE4Q8N205 404 aa26.64■■□□□ 1.86
SEC13-217ENST00000482647 ZBTB38Q8NAP3 1195 aaPredicted RBP26.64■■□□□ 1.86
SEC13-217ENST00000482647 IGKV5-2P06315 115 aa26.63■■□□□ 1.85
SEC13-217ENST00000482647 RPGRQ92834 1020 aaKnown RBP26.63■■□□□ 1.85
SEC13-217ENST00000482647 ANKRD31Q8N7Z5 1873 aa26.63■■□□□ 1.85
SEC13-217ENST00000482647 HCLS1P14317 486 aaPredicted RBP26.62■■□□□ 1.85
SEC13-217ENST00000482647 SMC4Q9NTJ3 1288 aa26.62■■□□□ 1.85
SEC13-217ENST00000482647 ANKRD36CQ5JPF3 1778 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 ARFGEF2Q9Y6D5 1785 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 CACNA1FO60840 1977 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 NEURL1BA8MQ27 555 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 HSP90B1P14625 803 aaKnown RBP26.61■■□□□ 1.85
SEC13-217ENST00000482647 ALDH1B1P30837 517 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 ARHGAP27Q6ZUM4 889 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 LINS1Q8NG48 757 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 BCL2L13Q9BXK5 485 aa26.61■■□□□ 1.85
SEC13-217ENST00000482647 F6X3S4 739 aa26.6■■□□□ 1.85
SEC13-217ENST00000482647 PCCAP05165 728 aaPredicted RBP26.6■■□□□ 1.85
SEC13-217ENST00000482647 HOXA10P31260 410 aaPredicted RBP26.6■■□□□ 1.85
SEC13-217ENST00000482647 CWF19L2Q2TBE0 894 aaKnown RBP26.6■■□□□ 1.85
SEC13-217ENST00000482647 RTL5Q5HYW3 569 aaPredicted RBP26.6■■□□□ 1.85
SEC13-217ENST00000482647 C3orf67Q6ZVT6 689 aa26.6■■□□□ 1.85
SEC13-217ENST00000482647 PTPRCP08575 1304 aa26.6■■□□□ 1.85
SEC13-217ENST00000482647 IRS4O14654 1257 aaPredicted RBP26.59■■□□□ 1.85
SEC13-217ENST00000482647 PRPF40BQ6NWY9 871 aaKnown RBP26.59■■□□□ 1.85
SEC13-217ENST00000482647 RBM17Q96I25 401 aaKnown RBP26.59■■□□□ 1.85
SEC13-217ENST00000482647 RARSP54136 660 aaKnown RBP26.58■■□□□ 1.85
SEC13-217ENST00000482647 GCKRQ14397 625 aa26.57■■□□□ 1.84
SEC13-217ENST00000482647 C21orf2O43822 256 aa26.56■■□□□ 1.84
SEC13-217ENST00000482647 BEND3Q5T5X7 828 aa26.56■■□□□ 1.84
SEC13-217ENST00000482647 CRAMP1Q96RY5 1269 aa26.56■■□□□ 1.84
SEC13-217ENST00000482647 BRCA1P38398 1863 aaKnown RBP26.55■■□□□ 1.84
SEC13-217ENST00000482647 BRPF1P55201 1214 aaPredicted RBP26.55■■□□□ 1.84
SEC13-217ENST00000482647 SLC4A10Q6U841 1118 aa26.55■■□□□ 1.84
SEC13-217ENST00000482647 ZNF219Q9P2Y4 722 aaPredicted RBP26.55■■□□□ 1.84
SEC13-217ENST00000482647 DLEC1Q9Y238 1755 aa26.54■■□□□ 1.84
SEC13-217ENST00000482647 SF3B3Q15393 1217 aaKnown RBP26.54■■□□□ 1.84
SEC13-217ENST00000482647 SOGA3Q5TF21 947 aa26.54■■□□□ 1.84
SEC13-217ENST00000482647 JARID2Q92833 1246 aaPredicted RBP26.54■■□□□ 1.84
SEC13-217ENST00000482647 COL11A2P13942 1736 aaPredicted RBP26.53■■□□□ 1.84
SEC13-217ENST00000482647 H7C1W4 665 aa26.53■■□□□ 1.84
SEC13-217ENST00000482647 NOB1Q9ULX3 412 aaKnown RBP26.53■■□□□ 1.84
SEC13-217ENST00000482647 CDHR2Q9BYE9 1310 aa26.53■■□□□ 1.84
SEC13-217ENST00000482647 TNRC6CQ9HCJ0 1690 aaKnown RBP26.53■■□□□ 1.84
SEC13-217ENST00000482647 YY1P25490 414 aa26.52■■□□□ 1.84
SEC13-217ENST00000482647 DDX46Q7L014 1031 aaKnown RBP26.52■■□□□ 1.84
SEC13-217ENST00000482647 SRCIN1Q9C0H9 1055 aa26.52■■□□□ 1.84
SEC13-217ENST00000482647 PDE8AO60658 829 aa26.51■■□□□ 1.83
SEC13-217ENST00000482647 ALDH1L1O75891 902 aa26.51■■□□□ 1.83
SEC13-217ENST00000482647 UBE3BQ7Z3V4 1068 aa26.51■■□□□ 1.83
SEC13-217ENST00000482647 C7orf43Q8WVR3 580 aa26.51■■□□□ 1.83
SEC13-217ENST00000482647 BBOX1O75936 387 aa26.49■■□□□ 1.83
SEC13-217ENST00000482647 ABCC4O15439 1325 aa26.48■■□□□ 1.83
SEC13-217ENST00000482647 KIF16BQ96L93 1317 aa26.48■■□□□ 1.83
SEC13-217ENST00000482647 API5Q9BZZ5 524 aaKnown RBP26.48■■□□□ 1.83
SEC13-217ENST00000482647 TMX4Q9H1E5 349 aaPredicted RBP26.48■■□□□ 1.83
SEC13-217ENST00000482647 ARFGEF1Q9Y6D6 1849 aa26.48■■□□□ 1.83
SEC13-217ENST00000482647 PPEF1O14829 653 aaPredicted RBP26.47■■□□□ 1.83
SEC13-217ENST00000482647 GRAPQ13588 217 aa26.47■■□□□ 1.83
SEC13-217ENST00000482647 CCDC152Q4G0S7 254 aa26.47■■□□□ 1.83
SEC13-217ENST00000482647 CCDC93Q567U6 631 aa26.47■■□□□ 1.83
SEC13-217ENST00000482647 CC2D2BQ6DHV5 1058 aa26.47■■□□□ 1.83
SEC13-217ENST00000482647 RTKN2Q8IZC4 609 aa26.47■■□□□ 1.83
SEC13-217ENST00000482647 GRAPLQ8TC17 118 aaPredicted RBP26.47■■□□□ 1.83
SEC13-217ENST00000482647 ARHGAP45Q92619 1136 aa26.47■■□□□ 1.83
SEC13-217ENST00000482647 C9orf78Q9NZ63 289 aaPredicted RBP26.47■■□□□ 1.83
SEC13-217ENST00000482647 IPO8O15397 1037 aaKnown RBP26.46■■□□□ 1.83
SEC13-217ENST00000482647 BCAR3O75815 825 aa26.46■■□□□ 1.83
SEC13-217ENST00000482647 CASP7P55210 303 aa26.46■■□□□ 1.83
SEC13-217ENST00000482647 SLX4Q8IY92 1834 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 501 ms