RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 RASA1P20936 1047 aa8.38□□□□□ -1.07
SCFD1-205ENST00000469043 SEC13P55735 322 aa8.38□□□□□ -1.07
SCFD1-205ENST00000469043 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-205ENST00000469043 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
SCFD1-205ENST00000469043 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
SCFD1-205ENST00000469043 NID1P14543 1247 aa8.37□□□□□ -1.07
SCFD1-205ENST00000469043 TBC1D8BQ0IIM8 1120 aa8.37□□□□□ -1.07
SCFD1-205ENST00000469043 ZMYM1Q5SVZ6 1142 aa8.37□□□□□ -1.07
SCFD1-205ENST00000469043 C20orf204Q6ZNR8 217 aa8.37□□□□□ -1.07
SCFD1-205ENST00000469043 BTLAQ7Z6A9 289 aa8.37□□□□□ -1.07
SCFD1-205ENST00000469043 SCG3Q8WXD2 468 aaKnown RBP8.37□□□□□ -1.07
SCFD1-205ENST00000469043 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
SCFD1-205ENST00000469043 C2orf49Q9BVC5 232 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-205ENST00000469043 C9orf172C9J069 976 aa8.36□□□□□ -1.07
SCFD1-205ENST00000469043 C21orf2O43822 256 aa8.36□□□□□ -1.07
SCFD1-205ENST00000469043 ITGB7P26010 798 aa8.36□□□□□ -1.07
SCFD1-205ENST00000469043 GRIK4Q16099 956 aa8.36□□□□□ -1.07
SCFD1-205ENST00000469043 RSPO4Q2I0M5 234 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-205ENST00000469043 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
SCFD1-205ENST00000469043 PNMA5Q96PV4 448 aa8.36□□□□□ -1.07
SCFD1-205ENST00000469043 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
SCFD1-205ENST00000469043 TFIP11Q9UBB9 837 aaKnown RBP8.36□□□□□ -1.07
SCFD1-205ENST00000469043 DKK1O94907 266 aa8.35□□□□□ -1.07
SCFD1-205ENST00000469043 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
SCFD1-205ENST00000469043 RAC1P63000 192 aa8.34□□□□□ -1.07
SCFD1-205ENST00000469043 NKAPLQ5M9Q1 402 aa8.34□□□□□ -1.07
SCFD1-205ENST00000469043 GLMNQ92990 594 aa8.33□□□□□ -1.08
SCFD1-205ENST00000469043 JPH1Q9HDC5 661 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-205ENST00000469043 SLC6A14Q9UN76 642 aa8.33□□□□□ -1.08
SCFD1-205ENST00000469043 CCINQ13939 588 aa8.32□□□□□ -1.08
SCFD1-205ENST00000469043 PCSK7Q16549 785 aa8.32□□□□□ -1.08
SCFD1-205ENST00000469043 RTN1Q16799 776 aa8.32□□□□□ -1.08
SCFD1-205ENST00000469043 IER5Q5VY09 327 aa8.32□□□□□ -1.08
SCFD1-205ENST00000469043 NUDT8Q8WV74 236 aa8.32□□□□□ -1.08
SCFD1-205ENST00000469043 GSX2Q9BZM3 304 aa8.32□□□□□ -1.08
SCFD1-205ENST00000469043 MAFBQ9Y5Q3 323 aaPredicted RBP8.32□□□□□ -1.08
SCFD1-205ENST00000469043 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.32□□□□□ -1.08
SCFD1-205ENST00000469043 A0A0A0MRY4 1105 aa8.31□□□□□ -1.08
SCFD1-205ENST00000469043 DYRK3O43781 588 aa8.31□□□□□ -1.08
SCFD1-205ENST00000469043 ELNP15502 786 aa8.31□□□□□ -1.08
SCFD1-205ENST00000469043 EPB42P16452 691 aa8.31□□□□□ -1.08
SCFD1-205ENST00000469043 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
SCFD1-205ENST00000469043 DNAJB12Q9NXW2 375 aaKnown RBP8.31□□□□□ -1.08
SCFD1-205ENST00000469043 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
SCFD1-205ENST00000469043 TGFBR3LH3BV60 316 aa8.3□□□□□ -1.08
SCFD1-205ENST00000469043 RGS9O75916 674 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-205ENST00000469043 PSAPL1Q6NUJ1 521 aa8.3□□□□□ -1.08
SCFD1-205ENST00000469043 PROSER2Q86WR7 435 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-205ENST00000469043 IGFBP4P22692 258 aa8.29□□□□□ -1.08
SCFD1-205ENST00000469043 RANGAP1P46060 587 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-205ENST00000469043 ADGRE1Q14246 886 aa8.29□□□□□ -1.08
SCFD1-205ENST00000469043 FNBP4Q8N3X1 1017 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-205ENST00000469043 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
SCFD1-205ENST00000469043 LENG1Q96BZ8 264 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-205ENST00000469043 SELPP16109 830 aa8.28□□□□□ -1.08
SCFD1-205ENST00000469043 NFKB1P19838 968 aa8.28□□□□□ -1.08
SCFD1-205ENST00000469043 AFF1P51825 1210 aaKnown RBP8.28□□□□□ -1.08
SCFD1-205ENST00000469043 DPYDQ12882 1025 aa8.28□□□□□ -1.08
SCFD1-205ENST00000469043 CALR3Q96L12 384 aaKnown RBP8.28□□□□□ -1.08
SCFD1-205ENST00000469043 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
SCFD1-205ENST00000469043 H2AFB1P0C5Y9 115 aa8.27□□□□□ -1.09
SCFD1-205ENST00000469043 H2AFB2P0C5Z0 115 aa8.27□□□□□ -1.09
SCFD1-205ENST00000469043 PTK7Q13308 1070 aa8.27□□□□□ -1.09
SCFD1-205ENST00000469043 MBTPS1Q14703 1052 aa8.27□□□□□ -1.09
SCFD1-205ENST00000469043 TXNRD3Q86VQ6 643 aa8.27□□□□□ -1.09
SCFD1-205ENST00000469043 DMRTC2Q8IXT2 367 aaPredicted RBP8.27□□□□□ -1.09
SCFD1-205ENST00000469043 VRTNQ9H8Y1 702 aa8.27□□□□□ -1.09
SCFD1-205ENST00000469043 CRTC2Q53ET0 693 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-205ENST00000469043 PRSS36Q5K4E3 855 aa8.26□□□□□ -1.09
SCFD1-205ENST00000469043 KANK4Q5T7N3 995 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-205ENST00000469043 FAM35AQ86V20 835 aa8.26□□□□□ -1.09
SCFD1-205ENST00000469043 ANKMY2Q8IV38 441 aa8.26□□□□□ -1.09
SCFD1-205ENST00000469043 VTI1AQ96AJ9 217 aa8.26□□□□□ -1.09
SCFD1-205ENST00000469043 C11orf16Q9NQ32 467 aa8.26□□□□□ -1.09
SCFD1-205ENST00000469043 DMGDHQ9UI17 866 aaKnown RBP8.26□□□□□ -1.09
SCFD1-205ENST00000469043 USP21Q9UK80 565 aa8.26□□□□□ -1.09
SCFD1-205ENST00000469043 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
SCFD1-205ENST00000469043 MAP3K6O95382 1288 aa8.25□□□□□ -1.09
SCFD1-205ENST00000469043 FMR1NBQ8N0W7 255 aaPredicted RBP8.25□□□□□ -1.09
SCFD1-205ENST00000469043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.09
SCFD1-205ENST00000469043 BCS1LQ9Y276 419 aa8.25□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L21D6R901 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 LGR5O75473 907 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 CPB1P15086 417 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 ARID4AP29374 1257 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-205ENST00000469043 INPP5BP32019 993 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 IDH3AP50213 366 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 MSL1Q68DK7 614 aa8.24□□□□□ -1.09
SCFD1-205ENST00000469043 SHISA2Q6UWI4 295 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms