RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 NAA30Q147X3 362 aaPredicted RBP3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 RTN1Q16799 776 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 NOM1Q5C9Z4 860 aaKnown RBP3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 FAM26DQ5JW98 314 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 SLC27A3Q5K4L6 730 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 ZMYM1Q5SVZ6 1142 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 ALDH16A1Q8IZ83 802 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 CHMP7Q8WUX9 453 aaPredicted RBP3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 KLRG1Q96E93 195 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 MKNK1Q9BUB5 465 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 PHACTR1Q9C0D0 580 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 DMGDHQ9UI17 866 aaKnown RBP3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 NSFL1CQ9UNZ2 370 aaKnown RBP3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 BCS1LQ9Y276 419 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 HCN4Q9Y3Q4 1203 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 PARP3Q9Y6F1 533 aa3.48□□□□□ -1.85
NUCKS1-202ENST00000464938 BTBD11A6QL63 1104 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 MSX1P28360 303 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 GRIN2CQ14957 1233 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 RSPO4Q2I0M5 234 aaPredicted RBP3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 C11orf91Q3C1V1 193 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 TMCO4Q5TGY1 634 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 SLCO4C1Q6ZQN7 724 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 RIPOR1Q6ZS17 1223 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 RGS22Q8NE09 1264 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 TRERF1Q96PN7 1200 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 ZIC5Q96T25 663 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 CFHR5Q9BXR6 569 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 CRISPLD1Q9H336 500 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 STIM2Q9P246 746 aa3.47□□□□□ -1.85
NUCKS1-202ENST00000464938 A0A1B0GTH6 734 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 C2CD2LO14523 706 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 GNB5O14775 395 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 ZBTB39O15060 712 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 FAM13AO94988 1023 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 GTF2E1P29083 439 aaPredicted RBP3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 PHKA2P46019 1235 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 PLA2G4AP47712 749 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 MFAP1P55081 439 aaKnown RBP3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 ZNF211Q13398 564 aaPredicted RBP3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 MTMR3Q13615 1198 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 NKAPLQ5M9Q1 402 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 IER5Q5VY09 327 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 DNAJC14Q6Y2X3 702 aaPredicted RBP3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 EDARADDQ8WWZ3 215 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 VTI1AQ96AJ9 217 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 IFT43Q96FT9 208 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 SEMA6BQ9H3T3 888 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 GDF2Q9UK05 429 aaPredicted RBP3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 ZNF232Q9UNY5 417 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 CHMP3Q9Y3E7 222 aa3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 ARID1BQ8NFD5 2236 aaPredicted RBP3.46□□□□□ -1.86
NUCKS1-202ENST00000464938 OPLAHO14841 1288 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 FZD6O60353 706 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 ABL1P00519 1130 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 IGHA2P01877 340 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 F11P03951 625 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 MPSTP25325 297 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 BRD2P25440 801 aaKnown RBP3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 DOC2BQ14184 412 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 NBPF1Q3BBV0 1214 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 ARTNQ5T4W7 220 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 SAMD5Q5TGI4 173 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 ETFBKMTQ8IXQ9 262 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 GOLGA6L1Q8N7Z2 621 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 SUSD3Q96L08 255 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 GAS2L1Q99501 681 aaPredicted RBP3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 NUCKS1Q9H1E3 243 aaKnown RBP3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 TIMMDC1Q9NPL8 285 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 ANO2Q9NQ90 1003 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 NDFIP2Q9NV92 336 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 KLK14Q9P0G3 267 aa3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 CCDC9Q9Y3X0 531 aaKnown RBP3.45□□□□□ -1.86
NUCKS1-202ENST00000464938 A0A1W2PNR3 127 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 H3BRB1 525 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 TGFBR3LH3BV60 316 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 MICAL2O94851 1124 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 EPXP11678 715 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 TATP17735 454 aaPredicted RBP3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 INPP5BP32019 993 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 EIF1AXP47813 144 aaKnown RBP3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 DGKZQ13574 1117 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 LBRQ14739 615 aaKnown RBP3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 HIF1AQ16665 826 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 CCDC27Q2M243 656 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 ALKBH2Q6NS38 261 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 NLRP8Q86W28 1048 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 GLYCTKQ8IVS8 523 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 ABTB2Q8N961 1025 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 ZNF280CQ8ND82 737 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 NGLY1Q96IV0 654 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 CITED4Q96RK1 184 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 RBCK1Q9BYM8 510 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 TUT1Q9H6E5 874 aaKnown RBP3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 ANKIB1Q9P2G1 1089 aa3.44□□□□□ -1.86
NUCKS1-202ENST00000464938 ERCC3P19447 782 aa3.43□□□□□ -1.86
NUCKS1-202ENST00000464938 GRNP28799 593 aaKnown RBP3.43□□□□□ -1.86
NUCKS1-202ENST00000464938 KCNQ4P56696 695 aa3.43□□□□□ -1.86
NUCKS1-202ENST00000464938 COL19A1Q14993 1142 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms