RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 GTF2E1P29083 439 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-205ENST00000457463 FKBP5Q13451 457 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-205ENST00000457463 JARID2Q92833 1246 aaPredicted RBP15.64■□□□□ 0.09
CNOT3-205ENST00000457463 BCS1LQ9Y276 419 aa15.64■□□□□ 0.09
CNOT3-205ENST00000457463 ANKRD36CQ5JPF3 1778 aa15.63■□□□□ 0.09
CNOT3-205ENST00000457463 DDX58O95786 925 aaKnown RBP15.63■□□□□ 0.09
CNOT3-205ENST00000457463 PDE6BP35913 854 aa15.63■□□□□ 0.09
CNOT3-205ENST00000457463 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
CNOT3-205ENST00000457463 PPP1R42Q7Z4L9 355 aa15.63■□□□□ 0.09
CNOT3-205ENST00000457463 NYXQ9GZU5 481 aa15.63■□□□□ 0.09
CNOT3-205ENST00000457463 TNRC6CQ9HCJ0 1690 aaKnown RBP15.63■□□□□ 0.09
CNOT3-205ENST00000457463 COL11A2P13942 1736 aaPredicted RBP15.63■□□□□ 0.09
CNOT3-205ENST00000457463 IBTKQ9P2D0 1353 aaPredicted RBP15.62■□□□□ 0.09
CNOT3-205ENST00000457463 H0YIN7 160 aa15.62■□□□□ 0.09
CNOT3-205ENST00000457463 SRGNP10124 158 aa15.62■□□□□ 0.09
CNOT3-205ENST00000457463 CWF19L2Q2TBE0 894 aaKnown RBP15.62■□□□□ 0.09
CNOT3-205ENST00000457463 ZNF622Q969S3 477 aaKnown RBP eCLIP15.62■□□□□ 0.094e-7■□□□□ 9.2
CNOT3-205ENST00000457463 FAM89AQ96GI7 184 aa15.62■□□□□ 0.09
CNOT3-205ENST00000457463 PIM2Q9P1W9 311 aa15.62■□□□□ 0.09
CNOT3-205ENST00000457463 TRMT112Q9UI30 125 aaKnown RBP15.62■□□□□ 0.09
CNOT3-205ENST00000457463 KLRG2A4D1S0 409 aaPredicted RBP15.61■□□□□ 0.09
CNOT3-205ENST00000457463 HCLS1P14317 486 aaPredicted RBP15.61■□□□□ 0.09
CNOT3-205ENST00000457463 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
CNOT3-205ENST00000457463 DNAAF4Q8WXU2 420 aa15.61■□□□□ 0.09
CNOT3-205ENST00000457463 DALRD3Q5D0E6 543 aaKnown RBP15.6■□□□□ 0.09
CNOT3-205ENST00000457463 SLC10A5Q5PT55 438 aa15.6■□□□□ 0.09
CNOT3-205ENST00000457463 SLC51AQ86UW1 340 aa15.6■□□□□ 0.09
CNOT3-205ENST00000457463 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
CNOT3-205ENST00000457463 BRCA1P38398 1863 aaKnown RBP15.59■□□□□ 0.09
CNOT3-205ENST00000457463 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
CNOT3-205ENST00000457463 NEURL1BA8MQ27 555 aa15.59■□□□□ 0.09
CNOT3-205ENST00000457463 RARSP54136 660 aaKnown RBP15.59■□□□□ 0.09
CNOT3-205ENST00000457463 ALDH1L2Q3SY69 923 aa15.59■□□□□ 0.09
CNOT3-205ENST00000457463 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
CNOT3-205ENST00000457463 TTLL6Q8N841 843 aa15.58■□□□□ 0.08
CNOT3-205ENST00000457463 CCDC191Q8NCU4 936 aa15.58■□□□□ 0.08
CNOT3-205ENST00000457463 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
CNOT3-205ENST00000457463 CWC25Q9NXE8 425 aaPredicted RBP15.58■□□□□ 0.08
CNOT3-205ENST00000457463 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
CNOT3-205ENST00000457463 CT47B1P0C2W7 299 aaPredicted RBP15.57■□□□□ 0.08
CNOT3-205ENST00000457463 CRY2Q49AN0 593 aa15.57■□□□□ 0.08
CNOT3-205ENST00000457463 BEND3Q5T5X7 828 aa15.57■□□□□ 0.08
CNOT3-205ENST00000457463 STYK1Q6J9G0 422 aa15.57■□□□□ 0.08
CNOT3-205ENST00000457463 DLEC1Q9Y238 1755 aa15.57■□□□□ 0.08
CNOT3-205ENST00000457463 IRS4O14654 1257 aaPredicted RBP15.56■□□□□ 0.08
CNOT3-205ENST00000457463 GRIN3BO60391 1043 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 BCAR3O75815 825 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 NPR1P16066 1061 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 NEXNQ0ZGT2 675 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 SLC4A10Q6U841 1118 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 OLFM4Q6UX06 510 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 ZBTB38Q8NAP3 1195 aaPredicted RBP15.56■□□□□ 0.08
CNOT3-205ENST00000457463 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
CNOT3-205ENST00000457463 NLRP3Q96P20 1036 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 NOB1Q9ULX3 412 aaKnown RBP15.56■□□□□ 0.08
CNOT3-205ENST00000457463 PDZRN3Q9UPQ7 1066 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 RIC1Q4ADV7 1423 aa15.56■□□□□ 0.08
CNOT3-205ENST00000457463 RNF123Q5XPI4 1314 aa15.55■□□□□ 0.08
CNOT3-205ENST00000457463 C21orf2O43822 256 aa15.55■□□□□ 0.08
CNOT3-205ENST00000457463 PCCAP05165 728 aaPredicted RBP15.55■□□□□ 0.08
CNOT3-205ENST00000457463 PRPF40BQ6NWY9 871 aaKnown RBP15.55■□□□□ 0.08
CNOT3-205ENST00000457463 LINS1Q8NG48 757 aa15.55■□□□□ 0.08
CNOT3-205ENST00000457463 H7C1W4 665 aa15.54■□□□□ 0.08
CNOT3-205ENST00000457463 GCKRQ14397 625 aa15.54■□□□□ 0.08
CNOT3-205ENST00000457463 ARHGAP27Q6ZUM4 889 aa15.54■□□□□ 0.08
CNOT3-205ENST00000457463 CNKSR1Q969H4 720 aa15.54■□□□□ 0.08
CNOT3-205ENST00000457463 CCDC85AQ96PX6 553 aaPredicted RBP15.54■□□□□ 0.08
CNOT3-205ENST00000457463 TNNQ9UQP3 1299 aa15.54■□□□□ 0.08
CNOT3-205ENST00000457463 CACNA1FO60840 1977 aa15.54■□□□□ 0.08
CNOT3-205ENST00000457463 DDX60Q8IY21 1712 aaKnown RBP15.54■□□□□ 0.08
CNOT3-205ENST00000457463 PTPRCP08575 1304 aa15.53■□□□□ 0.08
CNOT3-205ENST00000457463 SLX4Q8IY92 1834 aa15.53■□□□□ 0.08
CNOT3-205ENST00000457463 HOXA10P31260 410 aaPredicted RBP15.53■□□□□ 0.08
CNOT3-205ENST00000457463 PRELPP51888 382 aa15.53■□□□□ 0.08
CNOT3-205ENST00000457463 CASP7P55210 303 aa15.53■□□□□ 0.08
CNOT3-205ENST00000457463 UBE3BQ7Z3V4 1068 aa15.53■□□□□ 0.08
CNOT3-205ENST00000457463 C7orf43Q8WVR3 580 aa15.53■□□□□ 0.08
CNOT3-205ENST00000457463 RPGRQ92834 1020 aaKnown RBP15.53■□□□□ 0.08
CNOT3-205ENST00000457463 COL4A1P02462 1669 aa15.53■□□□□ 0.08
CNOT3-205ENST00000457463 ABCC4O15439 1325 aa15.52■□□□□ 0.08
CNOT3-205ENST00000457463 BRPF1P55201 1214 aaPredicted RBP15.52■□□□□ 0.08
CNOT3-205ENST00000457463 RASSF7Q02833 373 aa15.52■□□□□ 0.08
CNOT3-205ENST00000457463 LAMB2P55268 1798 aa15.52■□□□□ 0.07
CNOT3-205ENST00000457463 CDHR2Q9BYE9 1310 aa15.51■□□□□ 0.07
CNOT3-205ENST00000457463 SF3B3Q15393 1217 aaKnown RBP15.51■□□□□ 0.07
CNOT3-205ENST00000457463 RBM17Q96I25 401 aaKnown RBP15.51■□□□□ 0.07
CNOT3-205ENST00000457463 SRCIN1Q9C0H9 1055 aa15.51■□□□□ 0.07
CNOT3-205ENST00000457463 SEC31BQ9NQW1 1179 aa15.51■□□□□ 0.07
CNOT3-205ENST00000457463 CACNA1SQ13698 1873 aa15.5■□□□□ 0.07
CNOT3-205ENST00000457463 ARFGEF1Q9Y6D6 1849 aa15.5■□□□□ 0.07
CNOT3-205ENST00000457463 NFKBIEO00221 500 aa15.5■□□□□ 0.07
CNOT3-205ENST00000457463 ALDH1B1P30837 517 aa15.5■□□□□ 0.07
CNOT3-205ENST00000457463 CELF1Q92879 486 aaKnown RBP15.5■□□□□ 0.07
CNOT3-205ENST00000457463 CRAMP1Q96RY5 1269 aa15.5■□□□□ 0.07
CNOT3-205ENST00000457463 PDE8AO60658 829 aa15.49■□□□□ 0.07
CNOT3-205ENST00000457463 EPHA10Q5JZY3 1008 aa15.49■□□□□ 0.07
CNOT3-205ENST00000457463 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
CNOT3-205ENST00000457463 GRM8O00222 908 aa15.48■□□□□ 0.07
CNOT3-205ENST00000457463 PPEF1O14829 653 aaPredicted RBP15.48■□□□□ 0.07
CNOT3-205ENST00000457463 ALDH1L1O75891 902 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms