RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 DALRD3Q5D0E6 543 aaKnown RBP15.11■□□□□ 0.01
HSPG2-206ENST00000439717 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
HSPG2-206ENST00000439717 PI4KAP1Q8N8J0 262 aa15.11■□□□□ 0.01
HSPG2-206ENST00000439717 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
HSPG2-206ENST00000439717 ZBED9Q6R2W3 1325 aa15.11■□□□□ 0.01
HSPG2-206ENST00000439717 ADCY9O60503 1353 aa15.11■□□□□ 0.01
HSPG2-206ENST00000439717 ATP5J2-PTCD1G3V325 749 aa15.1■□□□□ 0.01
HSPG2-206ENST00000439717 SRGNP10124 158 aa15.1■□□□□ 0.01
HSPG2-206ENST00000439717 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
HSPG2-206ENST00000439717 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
HSPG2-206ENST00000439717 STYK1Q6J9G0 422 aa15.1■□□□□ 0.01
HSPG2-206ENST00000439717 MYD88Q99836 296 aa15.1■□□□□ 0.01
HSPG2-206ENST00000439717 TRMT112Q9UI30 125 aaKnown RBP15.1■□□□□ 0.01
HSPG2-206ENST00000439717 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
HSPG2-206ENST00000439717 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
HSPG2-206ENST00000439717 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
HSPG2-206ENST00000439717 DLEC1Q9Y238 1755 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 NPR1P16066 1061 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 NEXNQ0ZGT2 675 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 ALDH1L2Q3SY69 923 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 TTLL6Q8N841 843 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 CCDC191Q8NCU4 936 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 MASTLQ96GX5 879 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
HSPG2-206ENST00000439717 CRY2Q49AN0 593 aa15.08■□□□□ 0
HSPG2-206ENST00000439717 MRPL50Q8N5N7 158 aaKnown RBP15.08■□□□□ 0
HSPG2-206ENST00000439717 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 0
HSPG2-206ENST00000439717 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
HSPG2-206ENST00000439717 WWC3Q9ULE0 1092 aa15.08■□□□□ 0
HSPG2-206ENST00000439717 DNAAF4Q8WXU2 420 aa15.07■□□□□ 0
HSPG2-206ENST00000439717 SSH1Q8WYL5 1049 aa15.07■□□□□ 0
HSPG2-206ENST00000439717 NLRP3Q96P20 1036 aa15.07■□□□□ 0
HSPG2-206ENST00000439717 COL11A2P13942 1736 aaPredicted RBP15.06■□□□□ 0
HSPG2-206ENST00000439717 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
HSPG2-206ENST00000439717 ZBTB38Q8NAP3 1195 aaPredicted RBP15.06■□□□□ 0
HSPG2-206ENST00000439717 GOLGB1Q14789 3259 aaKnown RBP15.06■□□□□ 0
HSPG2-206ENST00000439717 IGKV5-2P06315 115 aa15.05■□□□□ -0
HSPG2-206ENST00000439717 ALDH1B1P30837 517 aa15.05■□□□□ -0
HSPG2-206ENST00000439717 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
HSPG2-206ENST00000439717 LINS1Q8NG48 757 aa15.05■□□□□ -0
HSPG2-206ENST00000439717 FAM89AQ96GI7 184 aa15.05■□□□□ -0
HSPG2-206ENST00000439717 PTPRCP08575 1304 aa15.05■□□□□ -0
HSPG2-206ENST00000439717 TNRC6CQ9HCJ0 1690 aaKnown RBP15.05■□□□□ -0
HSPG2-206ENST00000439717 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
HSPG2-206ENST00000439717 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
HSPG2-206ENST00000439717 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
HSPG2-206ENST00000439717 HCLS1P14317 486 aaPredicted RBP15.04■□□□□ -0
HSPG2-206ENST00000439717 BRPF1P55201 1214 aaPredicted RBP15.04■□□□□ -0
HSPG2-206ENST00000439717 SYNE4Q8N205 404 aa15.04■□□□□ -0
HSPG2-206ENST00000439717 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
HSPG2-206ENST00000439717 SMC4Q9NTJ3 1288 aa15.04■□□□□ -0
HSPG2-206ENST00000439717 IRS4O14654 1257 aaPredicted RBP15.03■□□□□ -0
HSPG2-206ENST00000439717 PRPF40BQ6NWY9 871 aaKnown RBP15.03■□□□□ -0
HSPG2-206ENST00000439717 RBM17Q96I25 401 aaKnown RBP15.03■□□□□ -0
HSPG2-206ENST00000439717 CRAMP1Q96RY5 1269 aa15.03■□□□□ -0
HSPG2-206ENST00000439717 UTRNP46939 3433 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 CDHR2Q9BYE9 1310 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 F6X3S4 739 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 RARSP54136 660 aaKnown RBP15.02■□□□□ -0
HSPG2-206ENST00000439717 CWF19L2Q2TBE0 894 aaKnown RBP15.02■□□□□ -0
HSPG2-206ENST00000439717 BEND3Q5T5X7 828 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 SOGA3Q5TF21 947 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 ARHGAP27Q6ZUM4 889 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 BCL2L13Q9BXK5 485 aa15.02■□□□□ -0
HSPG2-206ENST00000439717 GCKRQ14397 625 aa15.01□□□□□ -0.01
HSPG2-206ENST00000439717 SF3B3Q15393 1217 aaKnown RBP15.01□□□□□ -0.01
HSPG2-206ENST00000439717 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
HSPG2-206ENST00000439717 H7C1W4 665 aa15□□□□□ -0.01
HSPG2-206ENST00000439717 C21orf2O43822 256 aa15□□□□□ -0.01
HSPG2-206ENST00000439717 PDE8AO60658 829 aa15□□□□□ -0.01
HSPG2-206ENST00000439717 C7orf43Q8WVR3 580 aa15□□□□□ -0.01
HSPG2-206ENST00000439717 DDX60Q8IY21 1712 aaKnown RBP15□□□□□ -0.01
HSPG2-206ENST00000439717 LAMB2P55268 1798 aa14.99□□□□□ -0.01
HSPG2-206ENST00000439717 ALDH1L1O75891 902 aa14.99□□□□□ -0.01
HSPG2-206ENST00000439717 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
HSPG2-206ENST00000439717 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
HSPG2-206ENST00000439717 CHD4Q14839 1912 aa14.99□□□□□ -0.01
HSPG2-206ENST00000439717 SLX4Q8IY92 1834 aa14.99□□□□□ -0.01
HSPG2-206ENST00000439717 KIF16BQ96L93 1317 aa14.98□□□□□ -0.01
HSPG2-206ENST00000439717 BBOX1O75936 387 aa14.98□□□□□ -0.01
HSPG2-206ENST00000439717 YY1P25490 414 aa14.98□□□□□ -0.01
HSPG2-206ENST00000439717 GRIPAP1Q4V328 841 aa14.98□□□□□ -0.01
HSPG2-206ENST00000439717 CC2D2BQ6DHV5 1058 aa14.98□□□□□ -0.01
HSPG2-206ENST00000439717 SRCIN1Q9C0H9 1055 aa14.98□□□□□ -0.01
HSPG2-206ENST00000439717 NOB1Q9ULX3 412 aaKnown RBP14.98□□□□□ -0.01
HSPG2-206ENST00000439717 ABCC4O15439 1325 aa14.97□□□□□ -0.01
HSPG2-206ENST00000439717 GRAPQ13588 217 aa14.97□□□□□ -0.01
HSPG2-206ENST00000439717 CCDC152Q4G0S7 254 aa14.97□□□□□ -0.01
HSPG2-206ENST00000439717 CCDC93Q567U6 631 aa14.97□□□□□ -0.01
HSPG2-206ENST00000439717 UBE3BQ7Z3V4 1068 aa14.97□□□□□ -0.01
HSPG2-206ENST00000439717 GRAPLQ8TC17 118 aaPredicted RBP14.97□□□□□ -0.01
HSPG2-206ENST00000439717 ARHGAP45Q92619 1136 aa14.97□□□□□ -0.01
HSPG2-206ENST00000439717 JARID2Q92833 1246 aaPredicted RBP14.97□□□□□ -0.01
HSPG2-206ENST00000439717 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
HSPG2-206ENST00000439717 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
HSPG2-206ENST00000439717 LTBP3Q9NS15 1303 aa14.96□□□□□ -0.01
HSPG2-206ENST00000439717 GRM8O00222 908 aa14.96□□□□□ -0.01
HSPG2-206ENST00000439717 PPEF1O14829 653 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms