RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 PI4KAP2A4QPH2 592 aa30.06■■■□□ 2.4
PDGFA-205ENST00000426681 DALRD3Q5D0E6 543 aaKnown RBP30.06■■■□□ 2.4
PDGFA-205ENST00000426681 PI4KAP1Q8N8J0 262 aa30.06■■■□□ 2.4
PDGFA-205ENST00000426681 METTL22Q9BUU2 404 aaPredicted RBP30.06■■■□□ 2.4
PDGFA-205ENST00000426681 WWC3Q9ULE0 1092 aa30.06■■■□□ 2.4
PDGFA-205ENST00000426681 MAP3K2Q9Y2U5 619 aa30.06■■■□□ 2.4
PDGFA-205ENST00000426681 ADCY9O60503 1353 aa30.05■■■□□ 2.4
PDGFA-205ENST00000426681 ABCC12Q96J65 1359 aa30.05■■■□□ 2.4
PDGFA-205ENST00000426681 ATP5J2-PTCD1G3V325 749 aa30.05■■■□□ 2.4
PDGFA-205ENST00000426681 SLC10A5Q5PT55 438 aa30.05■■■□□ 2.4
PDGFA-205ENST00000426681 BCS1LQ9Y276 419 aa30.05■■■□□ 2.4
PDGFA-205ENST00000426681 COL11A2P13942 1736 aaPredicted RBP30.05■■■□□ 2.4
PDGFA-205ENST00000426681 CT47B1P0C2W7 299 aaPredicted RBP30.04■■■□□ 2.4
PDGFA-205ENST00000426681 SRGNP10124 158 aa30.04■■■□□ 2.4
PDGFA-205ENST00000426681 GOLGB1Q14789 3259 aaKnown RBP30.04■■■□□ 2.4
PDGFA-205ENST00000426681 ZBED9Q6R2W3 1325 aa30.02■■■□□ 2.4
PDGFA-205ENST00000426681 ARFGEF1Q9Y6D6 1849 aa30.02■■■□□ 2.4
PDGFA-205ENST00000426681 STYK1Q6J9G0 422 aa30.02■■■□□ 2.4
PDGFA-205ENST00000426681 TTLL6Q8N841 843 aa30.02■■■□□ 2.4
PDGFA-205ENST00000426681 MYD88Q99836 296 aa30.02■■■□□ 2.4
PDGFA-205ENST00000426681 TRMT112Q9UI30 125 aaKnown RBP30.02■■■□□ 2.4
PDGFA-205ENST00000426681 FKBP5Q13451 457 aaPredicted RBP30.01■■■□□ 2.39
PDGFA-205ENST00000426681 CCDC191Q8NCU4 936 aa30.01■■■□□ 2.39
PDGFA-205ENST00000426681 MASTLQ96GX5 879 aa30.01■■■□□ 2.39
PDGFA-205ENST00000426681 SH3TC1Q8TE82 1336 aa30■■■□□ 2.39
PDGFA-205ENST00000426681 CRY2Q49AN0 593 aa30■■■□□ 2.39
PDGFA-205ENST00000426681 ZNF622Q969S3 477 aaKnown RBP eCLIP30■■■□□ 2.39
PDGFA-205ENST00000426681 TNRC6CQ9HCJ0 1690 aaKnown RBP30■■■□□ 2.39
PDGFA-205ENST00000426681 NPR1P16066 1061 aa29.99■■■□□ 2.39
PDGFA-205ENST00000426681 ALDH1L2Q3SY69 923 aa29.98■■■□□ 2.39
PDGFA-205ENST00000426681 MRPL50Q8N5N7 158 aaKnown RBP29.98■■■□□ 2.39
PDGFA-205ENST00000426681 SSH1Q8WYL5 1049 aa29.98■■■□□ 2.39
PDGFA-205ENST00000426681 CNKSR1Q969H4 720 aa29.98■■■□□ 2.39
PDGFA-205ENST00000426681 NEXNQ0ZGT2 675 aa29.97■■■□□ 2.39
PDGFA-205ENST00000426681 DNAAF4Q8WXU2 420 aa29.97■■■□□ 2.39
PDGFA-205ENST00000426681 UTRNP46939 3433 aa29.97■■■□□ 2.39
PDGFA-205ENST00000426681 CHD4Q14839 1912 aa29.96■■■□□ 2.39
PDGFA-205ENST00000426681 IGKV5-2P06315 115 aa29.96■■■□□ 2.39
PDGFA-205ENST00000426681 SYNE4Q8N205 404 aa29.96■■■□□ 2.39
PDGFA-205ENST00000426681 NLRP3Q96P20 1036 aa29.96■■■□□ 2.39
PDGFA-205ENST00000426681 CWC25Q9NXE8 425 aaPredicted RBP29.96■■■□□ 2.39
PDGFA-205ENST00000426681 ZBTB38Q8NAP3 1195 aaPredicted RBP29.95■■■□□ 2.39
PDGFA-205ENST00000426681 HOXA10P31260 410 aaPredicted RBP29.94■■■□□ 2.38
PDGFA-205ENST00000426681 FAM89AQ96GI7 184 aa29.94■■■□□ 2.38
PDGFA-205ENST00000426681 C3orf67Q6ZVT6 689 aa29.93■■■□□ 2.38
PDGFA-205ENST00000426681 NEURL1BA8MQ27 555 aa29.92■■■□□ 2.38
PDGFA-205ENST00000426681 PCCAP05165 728 aaPredicted RBP29.92■■■□□ 2.38
PDGFA-205ENST00000426681 HCLS1P14317 486 aaPredicted RBP29.92■■■□□ 2.38
PDGFA-205ENST00000426681 ALDH1B1P30837 517 aa29.91■■■□□ 2.38
PDGFA-205ENST00000426681 PRPF40BQ6NWY9 871 aaKnown RBP29.91■■■□□ 2.38
PDGFA-205ENST00000426681 LINS1Q8NG48 757 aa29.91■■■□□ 2.38
PDGFA-205ENST00000426681 SLX4Q8IY92 1834 aa29.91■■■□□ 2.38
PDGFA-205ENST00000426681 DDX60Q8IY21 1712 aaKnown RBP29.91■■■□□ 2.38
PDGFA-205ENST00000426681 F6X3S4 739 aa29.9■■■□□ 2.38
PDGFA-205ENST00000426681 BRPF1P55201 1214 aaPredicted RBP29.9■■■□□ 2.38
PDGFA-205ENST00000426681 CWF19L2Q2TBE0 894 aaKnown RBP29.9■■■□□ 2.38
PDGFA-205ENST00000426681 ARHGAP27Q6ZUM4 889 aa29.9■■■□□ 2.38
PDGFA-205ENST00000426681 RPGRQ92834 1020 aaKnown RBP29.9■■■□□ 2.38
PDGFA-205ENST00000426681 PTPRCP08575 1304 aa29.9■■■□□ 2.38
PDGFA-205ENST00000426681 LAMB2P55268 1798 aa29.9■■■□□ 2.38
PDGFA-205ENST00000426681 CRAMP1Q96RY5 1269 aa29.89■■■□□ 2.38
PDGFA-205ENST00000426681 SMC4Q9NTJ3 1288 aa29.89■■■□□ 2.38
PDGFA-205ENST00000426681 IRS4O14654 1257 aaPredicted RBP29.88■■■□□ 2.37
PDGFA-205ENST00000426681 HSP90B1P14625 803 aaKnown RBP29.88■■■□□ 2.37
PDGFA-205ENST00000426681 RBM17Q96I25 401 aaKnown RBP29.88■■■□□ 2.37
PDGFA-205ENST00000426681 BCL2L13Q9BXK5 485 aa29.88■■■□□ 2.37
PDGFA-205ENST00000426681 CACNA1SQ13698 1873 aa29.87■■■□□ 2.37
PDGFA-205ENST00000426681 RARSP54136 660 aaKnown RBP29.87■■■□□ 2.37
PDGFA-205ENST00000426681 GCKRQ14397 625 aa29.87■■■□□ 2.37
PDGFA-205ENST00000426681 RTL5Q5HYW3 569 aaPredicted RBP29.87■■■□□ 2.37
PDGFA-205ENST00000426681 BEND3Q5T5X7 828 aa29.87■■■□□ 2.37
PDGFA-205ENST00000426681 C7orf43Q8WVR3 580 aa29.87■■■□□ 2.37
PDGFA-205ENST00000426681 SF3B3Q15393 1217 aaKnown RBP29.86■■■□□ 2.37
PDGFA-205ENST00000426681 CDHR2Q9BYE9 1310 aa29.86■■■□□ 2.37
PDGFA-205ENST00000426681 C21orf2O43822 256 aa29.85■■■□□ 2.37
PDGFA-205ENST00000426681 H7C1W4 665 aa29.84■■■□□ 2.37
PDGFA-205ENST00000426681 SOGA3Q5TF21 947 aa29.84■■■□□ 2.37
PDGFA-205ENST00000426681 YY1P25490 414 aa29.82■■■□□ 2.36
PDGFA-205ENST00000426681 JARID2Q92833 1246 aaPredicted RBP29.82■■■□□ 2.36
PDGFA-205ENST00000426681 PDE8AO60658 829 aa29.81■■■□□ 2.36
PDGFA-205ENST00000426681 ZNF219Q9P2Y4 722 aaPredicted RBP29.81■■■□□ 2.36
PDGFA-205ENST00000426681 ALDH1L1O75891 902 aa29.8■■■□□ 2.36
PDGFA-205ENST00000426681 SLC4A10Q6U841 1118 aa29.8■■■□□ 2.36
PDGFA-205ENST00000426681 DDX46Q7L014 1031 aaKnown RBP29.8■■■□□ 2.36
PDGFA-205ENST00000426681 FER1L6Q2WGJ9 1857 aa29.8■■■□□ 2.36
PDGFA-205ENST00000426681 ABCC4O15439 1325 aa29.79■■■□□ 2.36
PDGFA-205ENST00000426681 CASP7P55210 303 aa29.79■■■□□ 2.36
PDGFA-205ENST00000426681 UBE3BQ7Z3V4 1068 aa29.79■■■□□ 2.36
PDGFA-205ENST00000426681 SRCIN1Q9C0H9 1055 aa29.79■■■□□ 2.36
PDGFA-205ENST00000426681 BBOX1O75936 387 aa29.78■■■□□ 2.36
PDGFA-205ENST00000426681 NOB1Q9ULX3 412 aaKnown RBP29.78■■■□□ 2.36
PDGFA-205ENST00000426681 SBF1O95248 1867 aa29.77■■■□□ 2.36
PDGFA-205ENST00000426681 NFKBIEO00221 500 aa29.77■■■□□ 2.36
PDGFA-205ENST00000426681 CCDC93Q567U6 631 aa29.77■■■□□ 2.36
PDGFA-205ENST00000426681 CC2D2BQ6DHV5 1058 aa29.77■■■□□ 2.36
PDGFA-205ENST00000426681 GRAPQ13588 217 aa29.76■■■□□ 2.35
PDGFA-205ENST00000426681 GRAPLQ8TC17 118 aaPredicted RBP29.76■■■□□ 2.35
PDGFA-205ENST00000426681 ARHGAP45Q92619 1136 aa29.76■■■□□ 2.35
PDGFA-205ENST00000426681 PLA2G12BQ9BX93 195 aa29.76■■■□□ 2.35
PDGFA-205ENST00000426681 KIF16BQ96L93 1317 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms