RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
SSBP3-205ENST00000417664 PCCAP05165 728 aaPredicted RBP20.54■□□□□ 0.88
SSBP3-205ENST00000417664 ANP32EQ9BTT0 268 aa20.54■□□□□ 0.88
SSBP3-205ENST00000417664 ECHDC1Q9NTX5 307 aa20.54■□□□□ 0.88
SSBP3-205ENST00000417664 PALLDQ8WX93 1383 aa20.53■□□□□ 0.88
SSBP3-205ENST00000417664 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
SSBP3-205ENST00000417664 ATP6V1AP38606 617 aa20.53■□□□□ 0.88
SSBP3-205ENST00000417664 LMBR1LQ6UX01 489 aa20.53■□□□□ 0.88
SSBP3-205ENST00000417664 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
SSBP3-205ENST00000417664 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
SSBP3-205ENST00000417664 THSD7AQ9UPZ6 1657 aa20.52■□□□□ 0.88
SSBP3-205ENST00000417664 EPB41L2O43491 1005 aaKnown RBP20.52■□□□□ 0.88
SSBP3-205ENST00000417664 MEX3CQ5U5Q3 659 aaKnown RBP20.52■□□□□ 0.88
SSBP3-205ENST00000417664 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
SSBP3-205ENST00000417664 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
SSBP3-205ENST00000417664 ZBTB38Q8NAP3 1195 aaPredicted RBP20.52■□□□□ 0.88
SSBP3-205ENST00000417664 EIF5P55010 431 aaKnown RBP20.51■□□□□ 0.87
SSBP3-205ENST00000417664 AACSQ86V21 672 aa20.51■□□□□ 0.87
SSBP3-205ENST00000417664 RILPL2Q969X0 211 aa20.51■□□□□ 0.87
SSBP3-205ENST00000417664 USP26Q9BXU7 913 aa20.51■□□□□ 0.87
SSBP3-205ENST00000417664 RREB1Q92766 1687 aa20.51■□□□□ 0.87
SSBP3-205ENST00000417664 HSPA1LP34931 641 aa20.51■□□□□ 0.87
SSBP3-205ENST00000417664 DZIP3Q86Y13 1208 aaKnown RBP20.51■□□□□ 0.87
SSBP3-205ENST00000417664 JARID2Q92833 1246 aaPredicted RBP20.51■□□□□ 0.87
SSBP3-205ENST00000417664 CDHR2Q9BYE9 1310 aa20.5■□□□□ 0.87
SSBP3-205ENST00000417664 A0A0G2JS52 829 aa20.5■□□□□ 0.87
SSBP3-205ENST00000417664 CHMLP26374 656 aa20.5■□□□□ 0.87
SSBP3-205ENST00000417664 SNX21Q969T3 373 aa20.5■□□□□ 0.87
SSBP3-205ENST00000417664 SIL1Q9H173 461 aa20.5■□□□□ 0.87
SSBP3-205ENST00000417664 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
SSBP3-205ENST00000417664 CRKLP46109 303 aaKnown RBP20.49■□□□□ 0.87
SSBP3-205ENST00000417664 INTS5Q6P9B9 1019 aaKnown RBP20.49■□□□□ 0.87
SSBP3-205ENST00000417664 ANKRD36CQ5JPF3 1778 aa20.49■□□□□ 0.87
SSBP3-205ENST00000417664 NLRP10Q86W26 655 aa20.48■□□□□ 0.87
SSBP3-205ENST00000417664 EAF2Q96CJ1 260 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-205ENST00000417664 GJD4Q96KN9 370 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-205ENST00000417664 ARXQ96QS3 562 aa20.48■□□□□ 0.87
SSBP3-205ENST00000417664 ESYT1Q9BSJ8 1104 aa20.48■□□□□ 0.87
SSBP3-205ENST00000417664 TBC1D2Q9BYX2 928 aa20.48■□□□□ 0.87
SSBP3-205ENST00000417664 SLC4A3P48751 1232 aa20.48■□□□□ 0.87
SSBP3-205ENST00000417664 KLHDC4Q8TBB5 520 aa20.48■□□□□ 0.87
SSBP3-205ENST00000417664 KCNQ2O43526 872 aa20.47■□□□□ 0.87
SSBP3-205ENST00000417664 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-205ENST00000417664 CIAO1O76071 339 aa20.47■□□□□ 0.87
SSBP3-205ENST00000417664 MYT1Q01538 1121 aa20.47■□□□□ 0.87
SSBP3-205ENST00000417664 HLFQ16534 295 aa20.47■□□□□ 0.87
SSBP3-205ENST00000417664 GPR108Q9NPR9 543 aa20.47■□□□□ 0.87
SSBP3-205ENST00000417664 IL15P40933 162 aaPredicted RBP20.46■□□□□ 0.87
SSBP3-205ENST00000417664 KIF2CQ99661 725 aa20.46■□□□□ 0.87
SSBP3-205ENST00000417664 TRPC5Q9UL62 973 aaPredicted RBP20.46■□□□□ 0.87
SSBP3-205ENST00000417664 CHMP3Q9Y3E7 222 aa20.46■□□□□ 0.87
SSBP3-205ENST00000417664 AK9Q5TCS8 1911 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 CSF1RP07333 972 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 ITPK1Q13572 414 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 HSCBQ8IWL3 235 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 ZNF34Q8IZ26 560 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 EVI5LQ96CN4 794 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 NUP98P52948 1817 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 ATRNO75882 1429 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 AFF2P51816 1311 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 RGL2O15211 777 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 CCDC57Q2TAC2 916 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 TNNI3KQ59H18 835 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 AK7Q96M32 723 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 FPGT-TNNI3KV9GXZ4 949 aa20.45■□□□□ 0.86
SSBP3-205ENST00000417664 RABEP1Q15276 862 aa20.44■□□□□ 0.86
SSBP3-205ENST00000417664 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
SSBP3-205ENST00000417664 IL27Q8NEV9 243 aa20.44■□□□□ 0.86
SSBP3-205ENST00000417664 TBC1D2BQ9UPU7 963 aa20.44■□□□□ 0.86
SSBP3-205ENST00000417664 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
SSBP3-205ENST00000417664 EYA2O00167 538 aa20.43■□□□□ 0.86
SSBP3-205ENST00000417664 HIP1O00291 1037 aa20.43■□□□□ 0.86
SSBP3-205ENST00000417664 TFCP2Q12800 502 aa20.43■□□□□ 0.86
SSBP3-205ENST00000417664 FAM89AQ96GI7 184 aa20.43■□□□□ 0.86
SSBP3-205ENST00000417664 CCDC8Q9H0W5 538 aaPredicted RBP20.43■□□□□ 0.86
SSBP3-205ENST00000417664 NHSQ6T4R5 1651 aa20.42■□□□□ 0.86
SSBP3-205ENST00000417664 MCCP23508 829 aa20.42■□□□□ 0.86
SSBP3-205ENST00000417664 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
SSBP3-205ENST00000417664 RUFY2Q8WXA3 655 aa20.42■□□□□ 0.86
SSBP3-205ENST00000417664 HSP90B1P14625 803 aaKnown RBP20.42■□□□□ 0.86
SSBP3-205ENST00000417664 ATG9AQ7Z3C6 839 aa20.42■□□□□ 0.86
SSBP3-205ENST00000417664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-205ENST00000417664 CNTNAP4Q9C0A0 1308 aa20.41■□□□□ 0.86
SSBP3-205ENST00000417664 ATP5JP18859 108 aa20.41■□□□□ 0.86
SSBP3-205ENST00000417664 GPTP24298 496 aa20.41■□□□□ 0.86
SSBP3-205ENST00000417664 TRMT112Q9UI30 125 aaKnown RBP20.41■□□□□ 0.86
SSBP3-205ENST00000417664 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
SSBP3-205ENST00000417664 MYH14Q7Z406 1995 aaKnown RBP20.4■□□□□ 0.86
SSBP3-205ENST00000417664 CAMTA2O94983 1202 aa20.4■□□□□ 0.86
SSBP3-205ENST00000417664 ANAPC15P60006 121 aa20.4■□□□□ 0.86
SSBP3-205ENST00000417664 IFIT5Q13325 482 aaKnown RBP20.4■□□□□ 0.86
SSBP3-205ENST00000417664 RC3H1Q5TC82 1133 aaKnown RBP20.4■□□□□ 0.86
SSBP3-205ENST00000417664 CLEC4GQ6UXB4 293 aa20.4■□□□□ 0.86
SSBP3-205ENST00000417664 TICAM2Q86XR7 235 aa20.4■□□□□ 0.86
SSBP3-205ENST00000417664 IRS4O14654 1257 aaPredicted RBP20.39■□□□□ 0.86
SSBP3-205ENST00000417664 SGSM2O43147 1006 aa20.39■□□□□ 0.86
SSBP3-205ENST00000417664 PDE8AO60658 829 aa20.39■□□□□ 0.86
SSBP3-205ENST00000417664 DBNLQ9UJU6 430 aaKnown RBP20.39■□□□□ 0.86
SSBP3-205ENST00000417664 MAP4K4O95819 1239 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-205ENST00000417664 CTSWP56202 376 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms