RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ZNF365Q70YC5 407 aa6.02□□□□□ -1.44
R3HDM1-204ENST00000410054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.02□□□□□ -1.44
R3HDM1-204ENST00000410054 KCNV2Q8TDN2 545 aa6.02□□□□□ -1.44
R3HDM1-204ENST00000410054 CCSER2Q9H7U1 834 aa6.02□□□□□ -1.44
R3HDM1-204ENST00000410054 LUC7LQ9NQ29 371 aaKnown RBP6.02□□□□□ -1.44
R3HDM1-204ENST00000410054 DKK3Q9UBP4 350 aa6.02□□□□□ -1.44
R3HDM1-204ENST00000410054 BICDL2A1A5D9 508 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 SART1O43290 800 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 CAVIN2O95810 425 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 KRT7P08729 469 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 KRT20P35900 424 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 IRX5P78411 483 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 INAQ16352 499 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 LMNTD2Q8IXW0 634 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 FAM9CQ8IZT9 166 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 TDRD7Q8NHU6 1098 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 OPTNQ96CV9 577 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 JADE2Q9NQC1 790 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 ZNF711Q9Y462 761 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 TRAK2O60296 914 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 SYNE3Q6ZMZ3 975 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 NANOGNBQ7Z5D8 188 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 CEP57Q86XR8 500 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 PRPF31Q8WWY3 499 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 VCX3BQ9H321 246 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 PAXBP1Q9Y5B6 917 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 U3KPZ7 1027 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 MAPK8IP3Q9UPT6 1336 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 KDM1AO60341 852 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 TROVE2P10155 538 aaKnown RBP eCLIP6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 KIF4BQ2VIQ3 1234 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 ERC1Q8IUD2 1116 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 PPP1R14CQ8TAE6 165 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 AS3MTQ9HBK9 375 aa6.02□□□□□ -1.45
R3HDM1-204ENST00000410054 ADD2P35612 726 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 ZSCAN26Q16670 478 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 DZIP1LQ8IYY4 767 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 CCAR2Q8N163 923 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 PNISRQ8TF01 805 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 RSPH1Q8WYR4 309 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 SGSM3Q96HU1 749 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 INTUQ9ULD6 942 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 RRP15Q9Y3B9 282 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 KINO60870 393 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 TSPAN9O75954 239 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 GNAT2P19087 354 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 AIMP1Q12904 312 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 PTPN14Q15678 1187 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 SKIDA1Q1XH10 827 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 ZNF394Q53GI3 561 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 MIER3Q7Z3K6 550 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 FERMT3Q86UX7 667 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 PROSER2Q86WR7 435 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 MAK16Q9BXY0 300 aaKnown RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 IP6K2Q9UHH9 426 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 DDHD2O94830 711 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 RCN1Q15293 331 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 TAF7Q15545 349 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 ITGB1BP2Q9UKP3 347 aa6.01□□□□□ -1.45
R3HDM1-204ENST00000410054 DCAF8L1A6NGE4 600 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 PPFIA2O75334 1257 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 E2F6O75461 281 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 PAK3O75914 559 aaPredicted RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 TUBA3CQ13748 450 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 KRT72Q14CN4 511 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 FAAH2Q6GMR7 532 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 DDX46Q7L014 1031 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 ARHGEF25Q86VW2 580 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 GATAD2AQ86YP4 633 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 TMEM57Q8N5G2 664 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 SAAL1Q96ER3 474 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 PRIMPOLQ96LW4 560 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 LARP6Q9BRS8 491 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 LUC7L2Q9Y383 392 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 SPECC1L-ADORA2AF8WAN1 911 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 DIXDC1Q155Q3 683 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 MCTP2Q6DN12 878 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 CCDC112Q8NEF3 446 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 GFM2Q969S9 779 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 ZNF396Q96N95 335 aaPredicted RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 ESF1Q9H501 851 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 ARHGEF10LQ9HCE6 1279 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 CHMP5Q9NZZ3 219 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 NEMFO60524 1076 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 USO1O60763 962 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 KRT13P13646 458 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 TXLNAP40222 546 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 NLRP5P59047 1200 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 FKBP15Q5T1M5 1219 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6□□□□□ -1.45
R3HDM1-204ENST00000410054 ATP6V0A1Q93050 837 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 PPP1R14BQ96C90 147 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 PPP1R9BQ96SB3 815 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 TUBA8Q9NY65 449 aaPredicted RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 ATP6V0A2Q9Y487 856 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 PLEKHG3A1L390 1219 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 KRT5P13647 590 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 NEDD9Q14511 834 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 IFNLR1Q8IU57 520 aaPredicted RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 RPAP2Q8IXW5 612 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms