RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 IBTKQ9P2D0 1353 aaPredicted RBP21.17■□□□□ 0.98
CXCL1-201ENST00000395761 ARFGEF2Q9Y6D5 1785 aa21.17■□□□□ 0.98
CXCL1-201ENST00000395761 ANKRD36CQ5JPF3 1778 aa21.16■□□□□ 0.98
CXCL1-201ENST00000395761 DCAF8L1A6NGE4 600 aa21.16■□□□□ 0.98
CXCL1-201ENST00000395761 TRIM28Q13263 835 aaKnown RBP21.16■□□□□ 0.98
CXCL1-201ENST00000395761 PIM2Q9P1W9 311 aa21.16■□□□□ 0.98
CXCL1-201ENST00000395761 TRMT112Q9UI30 125 aaKnown RBP21.16■□□□□ 0.98
CXCL1-201ENST00000395761 BCL2L13Q9BXK5 485 aa21.15■□□□□ 0.98
CXCL1-201ENST00000395761 KLRG2A4D1S0 409 aaPredicted RBP21.14■□□□□ 0.97
CXCL1-201ENST00000395761 IGKV5-2P06315 115 aa21.14■□□□□ 0.97
CXCL1-201ENST00000395761 CT47B1P0C2W7 299 aaPredicted RBP21.14■□□□□ 0.97
CXCL1-201ENST00000395761 BCS1LQ9Y276 419 aa21.14■□□□□ 0.97
CXCL1-201ENST00000395761 F6X3S4 739 aa21.13■□□□□ 0.97
CXCL1-201ENST00000395761 SLC10A5Q5PT55 438 aa21.13■□□□□ 0.97
CXCL1-201ENST00000395761 C3orf67Q6ZVT6 689 aa21.13■□□□□ 0.97
CXCL1-201ENST00000395761 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
CXCL1-201ENST00000395761 ZNF622Q969S3 477 aaKnown RBP eCLIP21.13■□□□□ 0.97
CXCL1-201ENST00000395761 SRGNP10124 158 aa21.12■□□□□ 0.97
CXCL1-201ENST00000395761 HCLS1P14317 486 aaPredicted RBP21.12■□□□□ 0.97
CXCL1-201ENST00000395761 ALDH1L2Q3SY69 923 aa21.12■□□□□ 0.97
CXCL1-201ENST00000395761 DALRD3Q5D0E6 543 aaKnown RBP21.12■□□□□ 0.97
CXCL1-201ENST00000395761 FAM89AQ96GI7 184 aa21.12■□□□□ 0.97
CXCL1-201ENST00000395761 PDZRN3Q9UPQ7 1066 aa21.12■□□□□ 0.97
CXCL1-201ENST00000395761 CACNA1FO60840 1977 aa21.12■□□□□ 0.97
CXCL1-201ENST00000395761 SH3TC1Q8TE82 1336 aa21.11■□□□□ 0.97
CXCL1-201ENST00000395761 CWF19L2Q2TBE0 894 aaKnown RBP21.11■□□□□ 0.97
CXCL1-201ENST00000395761 RTL5Q5HYW3 569 aaPredicted RBP21.11■□□□□ 0.97
CXCL1-201ENST00000395761 CCDC191Q8NCU4 936 aa21.11■□□□□ 0.97
CXCL1-201ENST00000395761 JARID2Q92833 1246 aaPredicted RBP21.11■□□□□ 0.97
CXCL1-201ENST00000395761 YTHDC1Q96MU7 727 aaKnown RBP21.11■□□□□ 0.97
CXCL1-201ENST00000395761 RNF123Q5XPI4 1314 aa21.1■□□□□ 0.97
CXCL1-201ENST00000395761 COL11A2P13942 1736 aaPredicted RBP21.1■□□□□ 0.97
CXCL1-201ENST00000395761 TNRC6CQ9HCJ0 1690 aaKnown RBP21.1■□□□□ 0.97
CXCL1-201ENST00000395761 RARSP54136 660 aaKnown RBP21.1■□□□□ 0.97
CXCL1-201ENST00000395761 NEXNQ0ZGT2 675 aa21.1■□□□□ 0.97
CXCL1-201ENST00000395761 TTLL6Q8N841 843 aa21.1■□□□□ 0.97
CXCL1-201ENST00000395761 MASTLQ96GX5 879 aa21.1■□□□□ 0.97
CXCL1-201ENST00000395761 SMC4Q9NTJ3 1288 aa21.1■□□□□ 0.97
CXCL1-201ENST00000395761 CWC25Q9NXE8 425 aaPredicted RBP21.1■□□□□ 0.97
CXCL1-201ENST00000395761 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
CXCL1-201ENST00000395761 NEURL1BA8MQ27 555 aa21.09■□□□□ 0.97
CXCL1-201ENST00000395761 CRY2Q49AN0 593 aa21.09■□□□□ 0.97
CXCL1-201ENST00000395761 STYK1Q6J9G0 422 aa21.09■□□□□ 0.97
CXCL1-201ENST00000395761 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
CXCL1-201ENST00000395761 GRIN3BO60391 1043 aa21.08■□□□□ 0.97
CXCL1-201ENST00000395761 NPR1P16066 1061 aa21.08■□□□□ 0.97
CXCL1-201ENST00000395761 RIC1Q4ADV7 1423 aa21.08■□□□□ 0.97
CXCL1-201ENST00000395761 ZBTB38Q8NAP3 1195 aaPredicted RBP21.08■□□□□ 0.97
CXCL1-201ENST00000395761 NLRP3Q96P20 1036 aa21.08■□□□□ 0.97
CXCL1-201ENST00000395761 BEND3Q5T5X7 828 aa21.07■□□□□ 0.96
CXCL1-201ENST00000395761 LINS1Q8NG48 757 aa21.07■□□□□ 0.96
CXCL1-201ENST00000395761 DLEC1Q9Y238 1755 aa21.07■□□□□ 0.96
CXCL1-201ENST00000395761 IRS4O14654 1257 aaPredicted RBP21.06■□□□□ 0.96
CXCL1-201ENST00000395761 PCCAP05165 728 aaPredicted RBP21.06■□□□□ 0.96
CXCL1-201ENST00000395761 CNKSR1Q969H4 720 aa21.06■□□□□ 0.96
CXCL1-201ENST00000395761 PTPRCP08575 1304 aa21.05■□□□□ 0.96
CXCL1-201ENST00000395761 GCKRQ14397 625 aa21.05■□□□□ 0.96
CXCL1-201ENST00000395761 SLC4A10Q6U841 1118 aa21.05■□□□□ 0.96
CXCL1-201ENST00000395761 ZNF219Q9P2Y4 722 aaPredicted RBP21.05■□□□□ 0.96
CXCL1-201ENST00000395761 NOB1Q9ULX3 412 aaKnown RBP21.05■□□□□ 0.96
CXCL1-201ENST00000395761 UTRNP46939 3433 aa21.04■□□□□ 0.96
CXCL1-201ENST00000395761 HOXA10P31260 410 aaPredicted RBP21.04■□□□□ 0.96
CXCL1-201ENST00000395761 BRPF1P55201 1214 aaPredicted RBP21.04■□□□□ 0.96
CXCL1-201ENST00000395761 PRPF40BQ6NWY9 871 aaKnown RBP21.04■□□□□ 0.96
CXCL1-201ENST00000395761 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
CXCL1-201ENST00000395761 BCAR3O75815 825 aa21.03■□□□□ 0.96
CXCL1-201ENST00000395761 ARHGAP27Q6ZUM4 889 aa21.03■□□□□ 0.96
CXCL1-201ENST00000395761 H7C1W4 665 aa21.02■□□□□ 0.96
CXCL1-201ENST00000395761 C21orf2O43822 256 aa21.02■□□□□ 0.96
CXCL1-201ENST00000395761 ALDH1B1P30837 517 aa21.02■□□□□ 0.96
CXCL1-201ENST00000395761 RBM17Q96I25 401 aaKnown RBP21.02■□□□□ 0.96
CXCL1-201ENST00000395761 SLX4Q8IY92 1834 aa21.01■□□□□ 0.95
CXCL1-201ENST00000395761 DDX60Q8IY21 1712 aaKnown RBP21.01■□□□□ 0.95
CXCL1-201ENST00000395761 UBE3BQ7Z3V4 1068 aa21.01■□□□□ 0.95
CXCL1-201ENST00000395761 CRAMP1Q96RY5 1269 aa21.01■□□□□ 0.95
CXCL1-201ENST00000395761 CDHR2Q9BYE9 1310 aa21.01■□□□□ 0.95
CXCL1-201ENST00000395761 ARFGEF1Q9Y6D6 1849 aa21■□□□□ 0.95
CXCL1-201ENST00000395761 SF3B3Q15393 1217 aaKnown RBP21■□□□□ 0.95
CXCL1-201ENST00000395761 OLFM4Q6UX06 510 aa21■□□□□ 0.95
CXCL1-201ENST00000395761 C7orf43Q8WVR3 580 aa21■□□□□ 0.95
CXCL1-201ENST00000395761 SRCIN1Q9C0H9 1055 aa21■□□□□ 0.95
CXCL1-201ENST00000395761 LAMB2P55268 1798 aa21■□□□□ 0.95
CXCL1-201ENST00000395761 CASP7P55210 303 aa20.99■□□□□ 0.95
CXCL1-201ENST00000395761 SLC51AQ86UW1 340 aa20.99■□□□□ 0.95
CXCL1-201ENST00000395761 PDE8AO60658 829 aa20.98■□□□□ 0.95
CXCL1-201ENST00000395761 ALDH1L1O75891 902 aa20.98■□□□□ 0.95
CXCL1-201ENST00000395761 ABCC4O15439 1325 aa20.98■□□□□ 0.95
CXCL1-201ENST00000395761 DDX46Q7L014 1031 aaKnown RBP20.97■□□□□ 0.95
CXCL1-201ENST00000395761 CCDC85AQ96PX6 553 aaPredicted RBP20.97■□□□□ 0.95
CXCL1-201ENST00000395761 CACNA1SQ13698 1873 aa20.96■□□□□ 0.95
CXCL1-201ENST00000395761 HSP90B1P14625 803 aaKnown RBP20.96■□□□□ 0.95
CXCL1-201ENST00000395761 ARHGAP45Q92619 1136 aa20.96■□□□□ 0.95
CXCL1-201ENST00000395761 FRAT1Q92837 279 aaPredicted RBP20.96■□□□□ 0.95
CXCL1-201ENST00000395761 API5Q9BZZ5 524 aaKnown RBP20.96■□□□□ 0.95
CXCL1-201ENST00000395761 KIF16BQ96L93 1317 aa20.96■□□□□ 0.95
CXCL1-201ENST00000395761 NFKBIEO00221 500 aa20.95■□□□□ 0.94
CXCL1-201ENST00000395761 GRM8O00222 908 aa20.95■□□□□ 0.94
CXCL1-201ENST00000395761 RASSF7Q02833 373 aa20.95■□□□□ 0.94
CXCL1-201ENST00000395761 SEC31BQ9NQW1 1179 aa20.95■□□□□ 0.94
CXCL1-201ENST00000395761 TNNQ9UQP3 1299 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms