RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MYRIPQ8NFW9 859 aa22.33■■□□□ 1.17
PPFIA1-202ENST00000389547 CDC42BPGQ6DT37 1551 aa22.32■■□□□ 1.16
PPFIA1-202ENST00000389547 KIF13AQ9H1H9 1805 aa22.32■■□□□ 1.16
PPFIA1-202ENST00000389547 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
PPFIA1-202ENST00000389547 CCAR2Q8N163 923 aaKnown RBP22.32■■□□□ 1.16
PPFIA1-202ENST00000389547 OVOS2A0A0J9YW53 1432 aa22.32■■□□□ 1.16
PPFIA1-202ENST00000389547 OVOS2Q6IE36 1432 aa22.32■■□□□ 1.16
PPFIA1-202ENST00000389547 LMBR1LQ6UX01 489 aa22.31■■□□□ 1.16
PPFIA1-202ENST00000389547 CWC25Q9NXE8 425 aaPredicted RBP22.31■■□□□ 1.16
PPFIA1-202ENST00000389547 USP31Q70CQ4 1352 aa22.31■■□□□ 1.16
PPFIA1-202ENST00000389547 KLHDC4Q8TBB5 520 aa22.31■■□□□ 1.16
PPFIA1-202ENST00000389547 GPS2Q13227 327 aa22.31■■□□□ 1.16
PPFIA1-202ENST00000389547 MPHOSPH8Q99549 860 aa22.31■■□□□ 1.16
PPFIA1-202ENST00000389547 DIP2AQ14689 1571 aa22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 ABCC4O15439 1325 aa22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 RAB11FIP3O75154 756 aa22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 SDSP20132 328 aa22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 BABAM1Q9NWV8 329 aa22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 HCLS1P14317 486 aaPredicted RBP22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 ATP6V1AP38606 617 aa22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 FAM98CQ17RN3 349 aaKnown RBP22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 SMC3Q9UQE7 1217 aa22.3■■□□□ 1.16
PPFIA1-202ENST00000389547 PDE1AP54750 535 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 HOMER1Q86YM7 354 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 DNAJC10Q8IXB1 793 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 TIGD1Q96MW7 591 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 KDM4FA0A1W2PPD8 638 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 UPF3BQ9BZI7 483 aaKnown RBP22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 TTC22Q5TAA0 569 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 ALDH1L1O75891 902 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 USP44Q9H0E7 712 aa22.29■■□□□ 1.16
PPFIA1-202ENST00000389547 RTL1A6NKG5 1358 aa22.28■■□□□ 1.16
PPFIA1-202ENST00000389547 ZNF445P59923 1031 aa22.28■■□□□ 1.16
PPFIA1-202ENST00000389547 GLRX3O76003 335 aaKnown RBP22.28■■□□□ 1.16
PPFIA1-202ENST00000389547 CALCOCO1Q9P1Z2 691 aa22.28■■□□□ 1.16
PPFIA1-202ENST00000389547 CYP27B1O15528 508 aa22.27■■□□□ 1.16
PPFIA1-202ENST00000389547 GOLGA6L1Q8N7Z2 621 aa22.27■■□□□ 1.16
PPFIA1-202ENST00000389547 PLEKHM2Q8IWE5 1019 aa22.27■■□□□ 1.16
PPFIA1-202ENST00000389547 TEX13AQ9BXU3 409 aaPredicted RBP22.27■■□□□ 1.16
PPFIA1-202ENST00000389547 G3V3G9 751 aa22.27■■□□□ 1.16
PPFIA1-202ENST00000389547 DCAF8Q5TAQ9 597 aa22.27■■□□□ 1.16
PPFIA1-202ENST00000389547 FBXW7Q969H0 707 aa22.27■■□□□ 1.16
PPFIA1-202ENST00000389547 HOXB7P09629 217 aa22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 ZGPATQ8N5A5 531 aaKnown RBP22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 BICC1Q9H694 974 aaKnown RBP22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 KIF24Q5T7B8 1368 aa22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 METTL24Q5JXM2 366 aa22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 TTC39AQ5SRH9 613 aa22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 BICD2Q8TD16 824 aa22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 WDR17Q8IZU2 1322 aa22.26■■□□□ 1.15
PPFIA1-202ENST00000389547 IFIT5Q13325 482 aaKnown RBP22.25■■□□□ 1.15
PPFIA1-202ENST00000389547 TMX4Q9H1E5 349 aaPredicted RBP22.25■■□□□ 1.15
PPFIA1-202ENST00000389547 UTP14CQ5TAP6 766 aaKnown RBP22.25■■□□□ 1.15
PPFIA1-202ENST00000389547 RNF20Q5VTR2 975 aa22.25■■□□□ 1.15
PPFIA1-202ENST00000389547 TNNT1P13805 278 aa22.25■■□□□ 1.15
PPFIA1-202ENST00000389547 RBM25P49756 843 aaKnown RBP22.24■■□□□ 1.15
PPFIA1-202ENST00000389547 SNRKQ9NRH2 765 aa22.24■■□□□ 1.15
PPFIA1-202ENST00000389547 ECHDC1Q9NTX5 307 aa22.24■■□□□ 1.15
PPFIA1-202ENST00000389547 CCDC192P0DO97 292 aa22.23■■□□□ 1.15
PPFIA1-202ENST00000389547 ASAP1Q9ULH1 1129 aa22.23■■□□□ 1.15
PPFIA1-202ENST00000389547 ARGLU1Q9NWB6 273 aaPredicted RBP22.23■■□□□ 1.15
PPFIA1-202ENST00000389547 WDR33Q9C0J8 1336 aaKnown RBP22.23■■□□□ 1.15
PPFIA1-202ENST00000389547 LRRFIP1Q32MZ4 808 aaKnown RBP22.23■■□□□ 1.15
PPFIA1-202ENST00000389547 FAM89AQ96GI7 184 aa22.23■■□□□ 1.15
PPFIA1-202ENST00000389547 MCM2P49736 904 aa22.22■■□□□ 1.15
PPFIA1-202ENST00000389547 MNS1Q8NEH6 495 aa22.22■■□□□ 1.15
PPFIA1-202ENST00000389547 BCL2L12Q9HB09 334 aa22.22■■□□□ 1.15
PPFIA1-202ENST00000389547 GTF2F1P35269 517 aaKnown RBP eCLIP22.22■■□□□ 1.152e-7■■■■■ 34.3
PPFIA1-202ENST00000389547 LDHAL6AQ6ZMR3 332 aa22.22■■□□□ 1.15
PPFIA1-202ENST00000389547 CARD10Q9BWT7 1032 aa22.22■■□□□ 1.15
PPFIA1-202ENST00000389547 ARHGAP23Q9P227 1491 aa22.22■■□□□ 1.15
PPFIA1-202ENST00000389547 FAM182BQ5T319 152 aa22.22■■□□□ 1.15
PPFIA1-202ENST00000389547 PRDM4Q9UKN5 801 aa22.21■■□□□ 1.15
PPFIA1-202ENST00000389547 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
PPFIA1-202ENST00000389547 LMBRD1Q9NUN5 540 aa22.21■■□□□ 1.15
PPFIA1-202ENST00000389547 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 LARP6Q9BRS8 491 aaKnown RBP22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 FOSBP53539 338 aa22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 STK11IPQ8N1F8 1099 aa22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 SUCLG2Q96I99 432 aa22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 CCDC183Q5T5S1 534 aa22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 SIRT2Q8IXJ6 389 aa22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 V9GYY5 206 aaPredicted RBP22.2■■□□□ 1.14
PPFIA1-202ENST00000389547 SLIT1O75093 1534 aa22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 RIOK3O14730 519 aaKnown RBP22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 DZIP3Q86Y13 1208 aaKnown RBP22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 ZPR1O75312 459 aa22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 CHAMP1Q96JM3 812 aa22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 METTL22Q9BUU2 404 aaPredicted RBP22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 MYOM1P52179 1685 aa22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 TMEM63CQ9P1W3 806 aa22.19■■□□□ 1.14
PPFIA1-202ENST00000389547 PAXIP1Q6ZW49 1069 aaPredicted RBP22.18■■□□□ 1.14
PPFIA1-202ENST00000389547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.18■■□□□ 1.141e-6■■■□□ 18.1
PPFIA1-202ENST00000389547 KRT222Q8N1A0 295 aa22.18■■□□□ 1.14
PPFIA1-202ENST00000389547 IDH1O75874 414 aaKnown RBP22.18■■□□□ 1.14
PPFIA1-202ENST00000389547 PIBF1Q8WXW3 757 aa22.18■■□□□ 1.14
PPFIA1-202ENST00000389547 HSP90AB3PQ58FF7 597 aa22.17■■□□□ 1.14
PPFIA1-202ENST00000389547 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms