RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RECKO95980 971 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 TCF3P15923 654 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 RHOQP17081 205 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 ATP2B2Q01814 1243 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 ALG1LQ6GMV1 187 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 TMC4Q7Z404 712 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 CRIPAKQ8N1N5 446 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 CSRNP1Q96S65 589 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 DUSP9Q99956 384 aaKnown RBP6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 DNAJC25Q9H1X3 360 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 NEUROD4Q9HD90 331 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 PARP2Q9UGN5 583 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 WWC3Q9ULE0 1092 aa6.14□□□□□ -1.43
RNU6-28P-201ENST00000362378 PNMA6FA0A0J9YX94 578 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 A0A1W2PNR3 127 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 FIGNL2A6NMB9 653 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 BMP1P13497 986 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 ITGAEP38570 1179 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 DAB2P98082 770 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 C8orf34Q49A92 452 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 LRRC69Q6ZNQ3 347 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 TTC16Q8NEE8 873 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 FBF1Q8TES7 1133 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 ZFP42Q96MM3 310 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 CFHR5Q9BXR6 569 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 C11orf16Q9NQ32 467 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 FNDC3AQ9Y2H6 1198 aaKnown RBP6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 RTCBQ9Y3I0 505 aaKnown RBP6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 DYRK1BQ9Y463 629 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 KCNMB2Q9Y691 235 aa6.13□□□□□ -1.43
RNU6-28P-201ENST00000362378 EIF1AYO14602 144 aaKnown RBP6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 F11P03951 625 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 TYRO3Q06418 890 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 ORC1Q13415 861 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 PDE12Q6L8Q7 609 aaKnown RBP6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 NLRP8Q86W28 1048 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 FRMD6Q96NE9 622 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 SETDB2Q96T68 719 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 BACH2Q9BYV9 841 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 DNMT3LQ9UJW3 386 aa6.12□□□□□ -1.43
RNU6-28P-201ENST00000362378 A6NHS1 94 aa6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 AXIN1O15169 862 aa6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 EPB42P16452 691 aa6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 GRNP28799 593 aaKnown RBP6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 TRIP4Q15650 581 aaPredicted RBP6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 PKDCCQ504Y2 493 aa6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 LDLRAD1Q5T700 205 aa6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 SAMD5Q5TGI4 173 aa6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 RNF19AQ9NV58 838 aa6.11□□□□□ -1.43
RNU6-28P-201ENST00000362378 UBAP1LF5GYI3 381 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 CPNE3O75131 537 aaKnown RBP6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 TNFRSF21O75509 655 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 EGFRP00533 1210 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 GNA15P30679 374 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 PSMD2Q13200 908 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 LBRQ14739 615 aaKnown RBP6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 TSNAXIP1Q2TAA8 658 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 CMTR1Q8N1G2 835 aaKnown RBP6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 CEP63Q96MT8 703 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 FAM161BQ96MY7 647 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 USP20Q9Y2K6 914 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 GJA3Q9Y6H8 435 aa6.1□□□□□ -1.43
RNU6-28P-201ENST00000362378 SENP3-EIF4A1A0A087X0R7 540 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 SCAMP3O14828 347 aaKnown RBP6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 SORBS3O60504 671 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 KCNQ4P56696 695 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 ZNF438Q7Z4V0 828 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 PGBD3Q8N328 593 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 SNX29Q8TEQ0 813 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 RUBCNLQ9H714 662 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 ELP3Q9H9T3 547 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 ZFYVE28Q9HCC9 887 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 GPAMQ9HCL2 828 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 MRS2Q9HD23 443 aa6.09□□□□□ -1.43
RNU6-28P-201ENST00000362378 FOXD3Q9UJU5 478 aaPredicted RBP6.08□□□□□ -1.44
RNU6-28P-201ENST00000362378 AK5Q9Y6K8 562 aa6.08□□□□□ -1.44
RNU6-28P-201ENST00000362378 GIPC1O14908 333 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 XYLBO75191 536 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 FAM157BP0CG42 384 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 EFHC2Q5JST6 749 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 CCDC74AQ96AQ1 378 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 GAS2L1Q99501 681 aaPredicted RBP6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 ZCCHC2Q9C0B9 1178 aaKnown RBP6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 BRD7Q9NPI1 651 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 ATP13A2Q9NQ11 1180 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 AAASQ9NRG9 546 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 TMEM63CQ9P1W3 806 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 VTI1BQ9UEU0 232 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 SPG7Q9UQ90 795 aa6.07□□□□□ -1.44
RNU6-28P-201ENST00000362378 SLC35F4A4IF30 521 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 EFSO43281 561 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 MAN1A2O60476 641 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 PHACTR2O75167 634 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 THBS1P07996 1170 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 UBAP2LQ14157 1087 aaKnown RBP6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 USPL1Q5W0Q7 1092 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 FIGNL1Q6PIW4 674 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms