RNA–Protein interactions for RNA: ENST00000299608.6

TMX3-201, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMX3, Length 4,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-201ENST00000299608 FILIP1Q7Z7B0 1213 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 RUFY1Q96T51 708 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 KAT14Q9H8E8 782 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 SEPT11Q9NVA2 429 aaKnown RBP12.44□□□□□ -0.42
TMX3-201ENST00000299608 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 VAMP4O75379 141 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 MCM4P33991 863 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 SSRP1Q08945 709 aaKnown RBP12.44□□□□□ -0.42
TMX3-201ENST00000299608 UBA5Q9GZZ9 404 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 CCNL1Q9UK58 526 aaPredicted RBP12.44□□□□□ -0.42
TMX3-201ENST00000299608 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
TMX3-201ENST00000299608 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
TMX3-201ENST00000299608 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 NAA16Q6N069 864 aaPredicted RBP12.43□□□□□ -0.42
TMX3-201ENST00000299608 TRAPPC3LQ5T215 181 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 NEK1Q96PY6 1258 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 LRRC2Q9BYS8 371 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 NYXQ9GZU5 481 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 TRPM2O94759 1503 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 HMGN5P82970 282 aaKnown RBP12.43□□□□□ -0.42
TMX3-201ENST00000299608 FAM177A1Q8N128 213 aaPredicted RBP12.43□□□□□ -0.42
TMX3-201ENST00000299608 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
TMX3-201ENST00000299608 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
TMX3-201ENST00000299608 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 ATP8B2P98198 1209 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 NCOA7Q8NI08 942 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 ORC3Q9UBD5 711 aaPredicted RBP12.42□□□□□ -0.42
TMX3-201ENST00000299608 SLC4A4Q9Y6R1 1079 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
TMX3-201ENST00000299608 PANK2Q9BZ23 570 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
TMX3-201ENST00000299608 SDSP20132 328 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 KIF5BP33176 963 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 PDE1AP54750 535 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 JDP2Q8WYK2 163 aa12.42□□□□□ -0.42
TMX3-201ENST00000299608 PDIA4P13667 645 aaKnown RBP12.41□□□□□ -0.42
TMX3-201ENST00000299608 TNNT3P45378 269 aaPredicted RBP12.41□□□□□ -0.42
TMX3-201ENST00000299608 GSTO1P78417 241 aa12.41□□□□□ -0.42
TMX3-201ENST00000299608 BRF1Q92994 677 aa12.41□□□□□ -0.42
TMX3-201ENST00000299608 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
TMX3-201ENST00000299608 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
TMX3-201ENST00000299608 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
TMX3-201ENST00000299608 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
TMX3-201ENST00000299608 DDX21Q9NR30 783 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMX3-201ENST00000299608 A1BGP04217 495 aa12.41□□□□□ -0.42
TMX3-201ENST00000299608 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
TMX3-201ENST00000299608 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
TMX3-201ENST00000299608 LIG1P18858 919 aa12.4□□□□□ -0.42
TMX3-201ENST00000299608 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
TMX3-201ENST00000299608 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
TMX3-201ENST00000299608 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.4□□□□□ -0.42
TMX3-201ENST00000299608 CCDC24Q8N4L8 307 aa12.4□□□□□ -0.42
TMX3-201ENST00000299608 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
TMX3-201ENST00000299608 SCAND2PQ9GZW5 306 aaPredicted RBP12.4□□□□□ -0.42
TMX3-201ENST00000299608 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
TMX3-201ENST00000299608 SKIDA1Q1XH10 827 aa12.4□□□□□ -0.42
TMX3-201ENST00000299608 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
TMX3-201ENST00000299608 ECM2O94769 699 aaPredicted RBP12.4□□□□□ -0.43
TMX3-201ENST00000299608 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.43
TMX3-201ENST00000299608 TSPY3P0CV98 308 aa12.4□□□□□ -0.43
TMX3-201ENST00000299608 TSPY8P0CW00 308 aa12.4□□□□□ -0.43
TMX3-201ENST00000299608 TMEM266Q2M3C6 531 aa12.4□□□□□ -0.43
TMX3-201ENST00000299608 CFAP100Q494V2 611 aa12.4□□□□□ -0.43
TMX3-201ENST00000299608 ZNF804AQ7Z570 1209 aa12.4□□□□□ -0.43
TMX3-201ENST00000299608 MIGA1Q8NAN2 632 aa12.4□□□□□ -0.43
TMX3-201ENST00000299608 LUC7LQ9NQ29 371 aaKnown RBP12.4□□□□□ -0.43
TMX3-201ENST00000299608 ARGLU1Q9NWB6 273 aaPredicted RBP12.4□□□□□ -0.43
TMX3-201ENST00000299608 SYCE3A1L190 88 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 G2E3Q7L622 706 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
TMX3-201ENST00000299608 USP21Q9UK80 565 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 KLF18A0A0U1RQI7 1052 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 IDEP14735 1019 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 MCM5P33992 734 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 RDXP35241 583 aaKnown RBP12.39□□□□□ -0.43
TMX3-201ENST00000299608 PATL2C9JE40 543 aaKnown RBP12.39□□□□□ -0.43
TMX3-201ENST00000299608 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
TMX3-201ENST00000299608 WTAPQ15007 396 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 CNBD1Q8NA66 436 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 RLBP1P12271 317 aa12.39□□□□□ -0.43
TMX3-201ENST00000299608 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
TMX3-201ENST00000299608 NUCB1Q02818 461 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 NECAB1Q8N987 351 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 STK32BQ9NY57 414 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 SAMM50Q9Y512 469 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 TCOF1Q13428 1488 aaKnown RBP12.38□□□□□ -0.43
TMX3-201ENST00000299608 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
TMX3-201ENST00000299608 HSP90B2PQ58FF3 399 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 PER1O15534 1290 aaPredicted RBP12.38□□□□□ -0.43
TMX3-201ENST00000299608 SSFA2P28290 1259 aa12.38□□□□□ -0.43
TMX3-201ENST00000299608 GJB2P29033 226 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms