RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 YBX3P16989 372 aaKnown RBP eCLIP25.41■■□□□ 1.66
TIMP4-201ENST00000287814 ANKRD36CQ5JPF3 1778 aa25.41■■□□□ 1.66
TIMP4-201ENST00000287814 CT47B1P0C2W7 299 aaPredicted RBP25.4■■□□□ 1.66
TIMP4-201ENST00000287814 C2CD5Q86YS7 1000 aa25.4■■□□□ 1.66
TIMP4-201ENST00000287814 PELP1Q8IZL8 1130 aaKnown RBP25.4■■□□□ 1.66
TIMP4-201ENST00000287814 IGKV5-2P06315 115 aa25.39■■□□□ 1.66
TIMP4-201ENST00000287814 PDE6BP35913 854 aa25.39■■□□□ 1.66
TIMP4-201ENST00000287814 CACNA1FO60840 1977 aa25.39■■□□□ 1.66
TIMP4-201ENST00000287814 F6X3S4 739 aa25.39■■□□□ 1.65
TIMP4-201ENST00000287814 TRMT112Q9UI30 125 aaKnown RBP25.39■■□□□ 1.65
TIMP4-201ENST00000287814 GPR162Q16538 588 aa25.38■■□□□ 1.65
TIMP4-201ENST00000287814 ALDH1L2Q3SY69 923 aa25.38■■□□□ 1.65
TIMP4-201ENST00000287814 KLRG2A4D1S0 409 aaPredicted RBP25.37■■□□□ 1.65
TIMP4-201ENST00000287814 H0YIN7 160 aa25.37■■□□□ 1.65
TIMP4-201ENST00000287814 DNAAF4Q8WXU2 420 aa25.37■■□□□ 1.65
TIMP4-201ENST00000287814 RARSP54136 660 aaKnown RBP25.36■■□□□ 1.65
TIMP4-201ENST00000287814 PIM2Q9P1W9 311 aa25.36■■□□□ 1.65
TIMP4-201ENST00000287814 SRGNP10124 158 aa25.36■■□□□ 1.65
TIMP4-201ENST00000287814 CWF19L2Q2TBE0 894 aaKnown RBP25.36■■□□□ 1.65
TIMP4-201ENST00000287814 SLC10A5Q5PT55 438 aa25.36■■□□□ 1.65
TIMP4-201ENST00000287814 C3orf67Q6ZVT6 689 aa25.36■■□□□ 1.65
TIMP4-201ENST00000287814 FAM89AQ96GI7 184 aa25.36■■□□□ 1.65
TIMP4-201ENST00000287814 SMC4Q9NTJ3 1288 aa25.36■■□□□ 1.65
TIMP4-201ENST00000287814 CCDC191Q8NCU4 936 aa25.35■■□□□ 1.65
TIMP4-201ENST00000287814 SH3TC1Q8TE82 1336 aa25.34■■□□□ 1.65
TIMP4-201ENST00000287814 HCLS1P14317 486 aaPredicted RBP25.34■■□□□ 1.65
TIMP4-201ENST00000287814 RTL5Q5HYW3 569 aaPredicted RBP25.34■■□□□ 1.65
TIMP4-201ENST00000287814 BCS1LQ9Y276 419 aa25.34■■□□□ 1.65
TIMP4-201ENST00000287814 TNRC6CQ9HCJ0 1690 aaKnown RBP25.34■■□□□ 1.65
TIMP4-201ENST00000287814 JARID2Q92833 1246 aaPredicted RBP25.33■■□□□ 1.65
TIMP4-201ENST00000287814 ZNF622Q969S3 477 aaKnown RBP eCLIP25.33■■□□□ 1.65
TIMP4-201ENST00000287814 CWC25Q9NXE8 425 aaPredicted RBP25.33■■□□□ 1.65
TIMP4-201ENST00000287814 COL11A2P13942 1736 aaPredicted RBP25.33■■□□□ 1.65
TIMP4-201ENST00000287814 RNF123Q5XPI4 1314 aa25.33■■□□□ 1.65
TIMP4-201ENST00000287814 NEURL1BA8MQ27 555 aa25.32■■□□□ 1.64
TIMP4-201ENST00000287814 NEXNQ0ZGT2 675 aa25.32■■□□□ 1.64
TIMP4-201ENST00000287814 PDZRN3Q9UPQ7 1066 aa25.32■■□□□ 1.64
TIMP4-201ENST00000287814 BRCA1P38398 1863 aaKnown RBP25.32■■□□□ 1.64
TIMP4-201ENST00000287814 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
TIMP4-201ENST00000287814 RIC1Q4ADV7 1423 aa25.32■■□□□ 1.64
TIMP4-201ENST00000287814 DCAF8L1A6NGE4 600 aa25.31■■□□□ 1.64
TIMP4-201ENST00000287814 DALRD3Q5D0E6 543 aaKnown RBP25.31■■□□□ 1.64
TIMP4-201ENST00000287814 BEND3Q5T5X7 828 aa25.31■■□□□ 1.64
TIMP4-201ENST00000287814 ZBTB38Q8NAP3 1195 aaPredicted RBP25.31■■□□□ 1.64
TIMP4-201ENST00000287814 LINS1Q8NG48 757 aa25.3■■□□□ 1.64
TIMP4-201ENST00000287814 MASTLQ96GX5 879 aa25.3■■□□□ 1.64
TIMP4-201ENST00000287814 BRPF1P55201 1214 aaPredicted RBP25.29■■□□□ 1.64
TIMP4-201ENST00000287814 STYK1Q6J9G0 422 aa25.29■■□□□ 1.64
TIMP4-201ENST00000287814 TTLL6Q8N841 843 aa25.29■■□□□ 1.64
TIMP4-201ENST00000287814 YTHDC1Q96MU7 727 aaKnown RBP25.29■■□□□ 1.64
TIMP4-201ENST00000287814 NOB1Q9ULX3 412 aaKnown RBP25.29■■□□□ 1.64
TIMP4-201ENST00000287814 PTPRCP08575 1304 aa25.29■■□□□ 1.64
TIMP4-201ENST00000287814 DLEC1Q9Y238 1755 aa25.29■■□□□ 1.64
TIMP4-201ENST00000287814 BCAR3O75815 825 aa25.29■■□□□ 1.64
TIMP4-201ENST00000287814 PCCAP05165 728 aaPredicted RBP25.29■■□□□ 1.64
TIMP4-201ENST00000287814 NLRP3Q96P20 1036 aa25.29■■□□□ 1.64
TIMP4-201ENST00000287814 NPR1P16066 1061 aa25.28■■□□□ 1.64
TIMP4-201ENST00000287814 GCKRQ14397 625 aa25.28■■□□□ 1.64
TIMP4-201ENST00000287814 SLC4A10Q6U841 1118 aa25.28■■□□□ 1.64
TIMP4-201ENST00000287814 IRS4O14654 1257 aaPredicted RBP25.27■■□□□ 1.64
TIMP4-201ENST00000287814 GRIN3BO60391 1043 aa25.26■■□□□ 1.63
TIMP4-201ENST00000287814 H7C1W4 665 aa25.25■■□□□ 1.63
TIMP4-201ENST00000287814 HOXA10P31260 410 aaPredicted RBP25.25■■□□□ 1.63
TIMP4-201ENST00000287814 CNKSR1Q969H4 720 aa25.25■■□□□ 1.63
TIMP4-201ENST00000287814 PRPF40BQ6NWY9 871 aaKnown RBP25.24■■□□□ 1.63
TIMP4-201ENST00000287814 DDX60Q8IY21 1712 aaKnown RBP25.23■■□□□ 1.63
TIMP4-201ENST00000287814 RPGRQ92834 1020 aaKnown RBP25.23■■□□□ 1.63
TIMP4-201ENST00000287814 CASP7P55210 303 aa25.23■■□□□ 1.63
TIMP4-201ENST00000287814 UBE3BQ7Z3V4 1068 aa25.23■■□□□ 1.63
TIMP4-201ENST00000287814 ZNF219Q9P2Y4 722 aaPredicted RBP25.23■■□□□ 1.63
TIMP4-201ENST00000287814 SRCIN1Q9C0H9 1055 aa25.22■■□□□ 1.63
TIMP4-201ENST00000287814 SLX4Q8IY92 1834 aa25.21■■□□□ 1.63
TIMP4-201ENST00000287814 CDHR2Q9BYE9 1310 aa25.21■■□□□ 1.63
TIMP4-201ENST00000287814 C21orf2O43822 256 aa25.21■■□□□ 1.63
TIMP4-201ENST00000287814 SF3B3Q15393 1217 aaKnown RBP25.21■■□□□ 1.63
TIMP4-201ENST00000287814 C7orf43Q8WVR3 580 aa25.21■■□□□ 1.63
TIMP4-201ENST00000287814 ALDH1B1P30837 517 aa25.2■■□□□ 1.63
TIMP4-201ENST00000287814 RBM17Q96I25 401 aaKnown RBP25.2■■□□□ 1.63
TIMP4-201ENST00000287814 CRAMP1Q96RY5 1269 aa25.2■■□□□ 1.63
TIMP4-201ENST00000287814 LAMB2P55268 1798 aa25.2■■□□□ 1.62
TIMP4-201ENST00000287814 ALDH1L1O75891 902 aa25.2■■□□□ 1.62
TIMP4-201ENST00000287814 ARHGAP27Q6ZUM4 889 aa25.2■■□□□ 1.62
TIMP4-201ENST00000287814 SLC51AQ86UW1 340 aa25.2■■□□□ 1.62
TIMP4-201ENST00000287814 TNNQ9UQP3 1299 aa25.2■■□□□ 1.62
TIMP4-201ENST00000287814 ARFGEF1Q9Y6D6 1849 aa25.19■■□□□ 1.62
TIMP4-201ENST00000287814 KIF16BQ96L93 1317 aa25.19■■□□□ 1.62
TIMP4-201ENST00000287814 PDE8AO60658 829 aa25.19■■□□□ 1.62
TIMP4-201ENST00000287814 OLFM4Q6UX06 510 aa25.19■■□□□ 1.62
TIMP4-201ENST00000287814 ABCC4O15439 1325 aa25.18■■□□□ 1.62
TIMP4-201ENST00000287814 ARHGAP45Q92619 1136 aa25.18■■□□□ 1.62
TIMP4-201ENST00000287814 FRAT1Q92837 279 aaPredicted RBP25.18■■□□□ 1.62
TIMP4-201ENST00000287814 API5Q9BZZ5 524 aaKnown RBP25.18■■□□□ 1.62
TIMP4-201ENST00000287814 GRM8O00222 908 aa25.17■■□□□ 1.62
TIMP4-201ENST00000287814 CCDC85AQ96PX6 553 aaPredicted RBP25.17■■□□□ 1.62
TIMP4-201ENST00000287814 CACNA1SQ13698 1873 aa25.16■■□□□ 1.62
TIMP4-201ENST00000287814 TRIM27P14373 513 aa25.15■■□□□ 1.62
TIMP4-201ENST00000287814 HSP90B1P14625 803 aaKnown RBP25.15■■□□□ 1.62
TIMP4-201ENST00000287814 DDX46Q7L014 1031 aaKnown RBP25.15■■□□□ 1.62
TIMP4-201ENST00000287814 NBPF7P0C2Y1 421 aaPredicted RBP25.14■■□□□ 1.62
TIMP4-201ENST00000287814 CTSWP56202 376 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 310.5 ms