RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 LMOD1P29536 600 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-201ENST00000261646 HSP90AA4PQ58FG1 418 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 MARCH6O60337 910 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 GBP3Q9H0R5 595 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 CRACR2AQ9BSW2 395 aa18.83■□□□□ 0.61
SREBF1-201ENST00000261646 KDM5DQ9BY66 1539 aa18.83■□□□□ 0.61
SREBF1-201ENST00000261646 MSH6P52701 1360 aa18.83■□□□□ 0.6
SREBF1-201ENST00000261646 CCDC12Q8WUD4 166 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-201ENST00000261646 ERVK-7P63135 1459 aa18.83■□□□□ 0.6
SREBF1-201ENST00000261646 ZNF75DP51815 510 aa18.82■□□□□ 0.6
SREBF1-201ENST00000261646 JARID2Q92833 1246 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-201ENST00000261646 U3KPZ7 1027 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-201ENST00000261646 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
SREBF1-201ENST00000261646 C10orf67Q8IYJ2 551 aa18.82■□□□□ 0.6
SREBF1-201ENST00000261646 UBASH3AP57075 661 aa18.82■□□□□ 0.6
SREBF1-201ENST00000261646 MTHFSDQ2M296 383 aaKnown RBP18.82■□□□□ 0.6
SREBF1-201ENST00000261646 TTC21BQ7Z4L5 1316 aa18.81■□□□□ 0.6
SREBF1-201ENST00000261646 PPIP5K1Q6PFW1 1433 aa18.81■□□□□ 0.6
SREBF1-201ENST00000261646 XBP1P17861 261 aa18.81■□□□□ 0.6
SREBF1-201ENST00000261646 UTP14CQ5TAP6 766 aaKnown RBP18.81■□□□□ 0.6
SREBF1-201ENST00000261646 SNX14Q9Y5W7 946 aa18.81■□□□□ 0.6
SREBF1-201ENST00000261646 VPS53Q5VIR6 699 aa18.81■□□□□ 0.6
SREBF1-201ENST00000261646 CCDC191Q8NCU4 936 aa18.8■□□□□ 0.6
SREBF1-201ENST00000261646 SYTL4Q96C24 671 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-201ENST00000261646 IFNKQ9P0W0 207 aa18.8■□□□□ 0.6
SREBF1-201ENST00000261646 CLSTN1O94985 981 aa18.8■□□□□ 0.6
SREBF1-201ENST00000261646 USP8P40818 1118 aa18.8■□□□□ 0.6
SREBF1-201ENST00000261646 HSP90AB3PQ58FF7 597 aa18.8■□□□□ 0.6
SREBF1-201ENST00000261646 GPATCH11Q8N954 259 aa18.8■□□□□ 0.6
SREBF1-201ENST00000261646 CCDC85AQ96PX6 553 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-201ENST00000261646 TTC37Q6PGP7 1564 aa18.8■□□□□ 0.6
SREBF1-201ENST00000261646 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-201ENST00000261646 ZNHIT6Q9NWK9 470 aaKnown RBP18.79■□□□□ 0.6
SREBF1-201ENST00000261646 CTNNA3Q9UI47 895 aa18.79■□□□□ 0.6
SREBF1-201ENST00000261646 CCDC158Q5M9N0 1113 aa18.79■□□□□ 0.6
SREBF1-201ENST00000261646 RAB11FIP4Q86YS3 637 aa18.79■□□□□ 0.6
SREBF1-201ENST00000261646 CNNM3Q8NE01 707 aa18.79■□□□□ 0.6
SREBF1-201ENST00000261646 ARHGEF5Q12774 1597 aa18.79■□□□□ 0.6
SREBF1-201ENST00000261646 SART3Q15020 963 aaKnown RBP18.79■□□□□ 0.6
SREBF1-201ENST00000261646 TRIM22Q8IYM9 498 aa18.79■□□□□ 0.6
SREBF1-201ENST00000261646 PDLIM2Q96JY6 352 aa18.79■□□□□ 0.6
SREBF1-201ENST00000261646 ZNF215Q9UL58 517 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-201ENST00000261646 MRPS27Q92552 414 aaKnown RBP18.78■□□□□ 0.6
SREBF1-201ENST00000261646 CENPHQ9H3R5 247 aa18.78■□□□□ 0.6
SREBF1-201ENST00000261646 ATP7AQ04656 1500 aa18.78■□□□□ 0.6
SREBF1-201ENST00000261646 HMGB1P09429 215 aaKnown RBP18.78■□□□□ 0.6
SREBF1-201ENST00000261646 IL13P35225 146 aa18.78■□□□□ 0.6
SREBF1-201ENST00000261646 CREB3L3Q68CJ9 461 aa18.78■□□□□ 0.6
SREBF1-201ENST00000261646 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
SREBF1-201ENST00000261646 NPATQ14207 1427 aa18.78■□□□□ 0.6
SREBF1-201ENST00000261646 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
SREBF1-201ENST00000261646 IBSPP21815 317 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-201ENST00000261646 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
SREBF1-201ENST00000261646 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-201ENST00000261646 HMG20BQ9P0W2 317 aa18.78■□□□□ 0.6
SREBF1-201ENST00000261646 CAPN2P17655 700 aa18.77■□□□□ 0.6
SREBF1-201ENST00000261646 TTC39AQ5SRH9 613 aa18.77■□□□□ 0.6
SREBF1-201ENST00000261646 RUFY3Q7L099 469 aa18.77■□□□□ 0.6
SREBF1-201ENST00000261646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-201ENST00000261646 BRMS1Q9HCU9 246 aa18.77■□□□□ 0.6
SREBF1-201ENST00000261646 RAI14Q9P0K7 980 aa18.77■□□□□ 0.6
SREBF1-201ENST00000261646 RSPH14Q9UHP6 348 aa18.77■□□□□ 0.6
SREBF1-201ENST00000261646 ORC3Q9UBD5 711 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-201ENST00000261646 YTHDC2Q9H6S0 1430 aaKnown RBP18.77■□□□□ 0.59
SREBF1-201ENST00000261646 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.59
SREBF1-201ENST00000261646 PNMA6EA0A0J9YXQ4 647 aa18.77■□□□□ 0.59
SREBF1-201ENST00000261646 SGSM2O43147 1006 aa18.77■□□□□ 0.59
SREBF1-201ENST00000261646 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.59
SREBF1-201ENST00000261646 KIAA1524Q8TCG1 905 aa18.77■□□□□ 0.59
SREBF1-201ENST00000261646 SMARCC1Q92922 1105 aaPredicted RBP18.77■□□□□ 0.59
SREBF1-201ENST00000261646 PA2G4Q9UQ80 394 aaKnown RBP18.77■□□□□ 0.59
SREBF1-201ENST00000261646 ABCC4O15439 1325 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 CDKL5O76039 1030 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 CDR1P51861 262 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 IMMTQ16891 758 aaKnown RBP18.76■□□□□ 0.59
SREBF1-201ENST00000261646 PUS7Q96PZ0 661 aaKnown RBP18.76■□□□□ 0.59
SREBF1-201ENST00000261646 MAGEC2Q9UBF1 373 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-201ENST00000261646 GOLGA6L9A6NEM1 432 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 LIG1P18858 919 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 Q6ZUG5 572 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 SIRT2Q8IXJ6 389 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 DHX37Q8IY37 1157 aaKnown RBP18.76■□□□□ 0.59
SREBF1-201ENST00000261646 IPO4Q8TEX9 1081 aaKnown RBP18.76■□□□□ 0.59
SREBF1-201ENST00000261646 GTF2A1P52655 376 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-201ENST00000261646 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-201ENST00000261646 CCDC181Q5TID7 509 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 TBC1D2BQ9UPU7 963 aa18.76■□□□□ 0.59
SREBF1-201ENST00000261646 PHACTR2O75167 634 aa18.75■□□□□ 0.59
SREBF1-201ENST00000261646 NUP133Q8WUM0 1156 aa18.75■□□□□ 0.59
SREBF1-201ENST00000261646 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
SREBF1-201ENST00000261646 SRRTQ9BXP5 876 aaKnown RBP18.75■□□□□ 0.59
SREBF1-201ENST00000261646 HSPA4P34932 840 aa18.75■□□□□ 0.59
SREBF1-201ENST00000261646 GOLGA8BA8MQT2 603 aa18.75■□□□□ 0.59
SREBF1-201ENST00000261646 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
SREBF1-201ENST00000261646 EVA1CP58658 441 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 CCDC148Q8NFR7 591 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 CLSTN2Q9H4D0 955 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 CEP126Q9P2H0 1117 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 PIK3R4Q99570 1358 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 RAD50Q92878 1312 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms