RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 COL11A2P13942 1736 aaPredicted RBP27.66■■■□□ 2.02
NXT1-201ENST00000254998 FLIIQ13045 1269 aa27.65■■■□□ 2.02
NXT1-201ENST00000254998 ZNF428Q96B54 188 aa27.65■■■□□ 2.02
NXT1-201ENST00000254998 WWC3Q9ULE0 1092 aa27.65■■■□□ 2.02
NXT1-201ENST00000254998 BCS1LQ9Y276 419 aa27.65■■■□□ 2.02
NXT1-201ENST00000254998 ADCY9O60503 1353 aa27.64■■■□□ 2.02
NXT1-201ENST00000254998 SRGNP10124 158 aa27.64■■■□□ 2.02
NXT1-201ENST00000254998 METTL22Q9BUU2 404 aaPredicted RBP27.64■■■□□ 2.02
NXT1-201ENST00000254998 ARFGEF1Q9Y6D6 1849 aa27.64■■■□□ 2.01
NXT1-201ENST00000254998 GOLGB1Q14789 3259 aaKnown RBP27.63■■■□□ 2.01
NXT1-201ENST00000254998 PI4KAP2A4QPH2 592 aa27.63■■■□□ 2.01
NXT1-201ENST00000254998 SLC10A5Q5PT55 438 aa27.63■■■□□ 2.01
NXT1-201ENST00000254998 STYK1Q6J9G0 422 aa27.63■■■□□ 2.01
NXT1-201ENST00000254998 TTLL6Q8N841 843 aa27.63■■■□□ 2.01
NXT1-201ENST00000254998 PI4KAP1Q8N8J0 262 aa27.63■■■□□ 2.01
NXT1-201ENST00000254998 MAP3K2Q9Y2U5 619 aa27.63■■■□□ 2.01
NXT1-201ENST00000254998 CT47B1P0C2W7 299 aaPredicted RBP27.62■■■□□ 2.01
NXT1-201ENST00000254998 MASTLQ96GX5 879 aa27.62■■■□□ 2.01
NXT1-201ENST00000254998 ATP5J2-PTCD1G3V325 749 aa27.61■■■□□ 2.01
NXT1-201ENST00000254998 CRY2Q49AN0 593 aa27.61■■■□□ 2.01
NXT1-201ENST00000254998 TRMT112Q9UI30 125 aaKnown RBP27.61■■■□□ 2.01
NXT1-201ENST00000254998 TNRC6CQ9HCJ0 1690 aaKnown RBP27.61■■■□□ 2.01
NXT1-201ENST00000254998 NPR1P16066 1061 aa27.6■■■□□ 2.01
NXT1-201ENST00000254998 CCDC191Q8NCU4 936 aa27.6■■■□□ 2.01
NXT1-201ENST00000254998 ZNF622Q969S3 477 aaKnown RBP eCLIP27.6■■■□□ 2.01
NXT1-201ENST00000254998 MYD88Q99836 296 aa27.6■■■□□ 2.01
NXT1-201ENST00000254998 SH3TC1Q8TE82 1336 aa27.6■■■□□ 2.01
NXT1-201ENST00000254998 CHD4Q14839 1912 aa27.59■■■□□ 2.01
NXT1-201ENST00000254998 FKBP5Q13451 457 aaPredicted RBP27.59■■■□□ 2.01
NXT1-201ENST00000254998 CNKSR1Q969H4 720 aa27.59■■■□□ 2.01
NXT1-201ENST00000254998 ZBED9Q6R2W3 1325 aa27.59■■■□□ 2.01
NXT1-201ENST00000254998 NEXNQ0ZGT2 675 aa27.56■■■□□ 2
NXT1-201ENST00000254998 ALDH1L2Q3SY69 923 aa27.56■■■□□ 2
NXT1-201ENST00000254998 UTRNP46939 3433 aa27.55■■■□□ 2
NXT1-201ENST00000254998 IGKV5-2P06315 115 aa27.55■■■□□ 2
NXT1-201ENST00000254998 HOXA10P31260 410 aaPredicted RBP27.55■■■□□ 2
NXT1-201ENST00000254998 MRPL50Q8N5N7 158 aaKnown RBP27.55■■■□□ 2
NXT1-201ENST00000254998 DNAAF4Q8WXU2 420 aa27.55■■■□□ 2
NXT1-201ENST00000254998 NLRP3Q96P20 1036 aa27.55■■■□□ 2
NXT1-201ENST00000254998 CWC25Q9NXE8 425 aaPredicted RBP27.55■■■□□ 2
NXT1-201ENST00000254998 SYNE4Q8N205 404 aa27.54■■■□□ 2
NXT1-201ENST00000254998 ZBTB38Q8NAP3 1195 aaPredicted RBP27.54■■■□□ 2
NXT1-201ENST00000254998 SSH1Q8WYL5 1049 aa27.54■■■□□ 2
NXT1-201ENST00000254998 C3orf67Q6ZVT6 689 aa27.53■■■□□ 2
NXT1-201ENST00000254998 FAM89AQ96GI7 184 aa27.53■■■□□ 2
NXT1-201ENST00000254998 PCCAP05165 728 aaPredicted RBP27.52■■■□□ 2
NXT1-201ENST00000254998 HCLS1P14317 486 aaPredicted RBP27.52■■■□□ 2
NXT1-201ENST00000254998 ALDH1B1P30837 517 aa27.52■■■□□ 2
NXT1-201ENST00000254998 PRPF40BQ6NWY9 871 aaKnown RBP27.52■■■□□ 2
NXT1-201ENST00000254998 SLX4Q8IY92 1834 aa27.52■■■□□ 2
NXT1-201ENST00000254998 NEURL1BA8MQ27 555 aa27.51■■□□□ 1.99
NXT1-201ENST00000254998 ARHGAP27Q6ZUM4 889 aa27.51■■□□□ 1.99
NXT1-201ENST00000254998 RPGRQ92834 1020 aaKnown RBP27.51■■□□□ 1.99
NXT1-201ENST00000254998 DDX60Q8IY21 1712 aaKnown RBP27.5■■□□□ 1.99
NXT1-201ENST00000254998 HSP90B1P14625 803 aaKnown RBP27.5■■□□□ 1.99
NXT1-201ENST00000254998 LINS1Q8NG48 757 aa27.5■■□□□ 1.99
NXT1-201ENST00000254998 CRAMP1Q96RY5 1269 aa27.5■■□□□ 1.99
NXT1-201ENST00000254998 LAMB2P55268 1798 aa27.5■■□□□ 1.99
NXT1-201ENST00000254998 C7orf43Q8WVR3 580 aa27.49■■□□□ 1.99
NXT1-201ENST00000254998 PTPRCP08575 1304 aa27.48■■□□□ 1.99
NXT1-201ENST00000254998 IRS4O14654 1257 aaPredicted RBP27.48■■□□□ 1.99
NXT1-201ENST00000254998 YY1P25490 414 aa27.48■■□□□ 1.99
NXT1-201ENST00000254998 BRPF1P55201 1214 aaPredicted RBP27.48■■□□□ 1.99
NXT1-201ENST00000254998 CWF19L2Q2TBE0 894 aaKnown RBP27.48■■□□□ 1.99
NXT1-201ENST00000254998 RBM17Q96I25 401 aaKnown RBP27.48■■□□□ 1.99
NXT1-201ENST00000254998 CDHR2Q9BYE9 1310 aa27.47■■□□□ 1.99
NXT1-201ENST00000254998 F6X3S4 739 aa27.47■■□□□ 1.99
NXT1-201ENST00000254998 SOGA3Q5TF21 947 aa27.47■■□□□ 1.99
NXT1-201ENST00000254998 SMC4Q9NTJ3 1288 aa27.47■■□□□ 1.99
NXT1-201ENST00000254998 CACNA1SQ13698 1873 aa27.47■■□□□ 1.99
NXT1-201ENST00000254998 C21orf2O43822 256 aa27.46■■□□□ 1.99
NXT1-201ENST00000254998 GCKRQ14397 625 aa27.46■■□□□ 1.99
NXT1-201ENST00000254998 SF3B3Q15393 1217 aaKnown RBP27.46■■□□□ 1.99
NXT1-201ENST00000254998 BEND3Q5T5X7 828 aa27.46■■□□□ 1.99
NXT1-201ENST00000254998 RARSP54136 660 aaKnown RBP27.45■■□□□ 1.98
NXT1-201ENST00000254998 RTL5Q5HYW3 569 aaPredicted RBP27.45■■□□□ 1.98
NXT1-201ENST00000254998 BCL2L13Q9BXK5 485 aa27.45■■□□□ 1.98
NXT1-201ENST00000254998 H7C1W4 665 aa27.44■■□□□ 1.98
NXT1-201ENST00000254998 PDE8AO60658 829 aa27.42■■□□□ 1.98
NXT1-201ENST00000254998 FER1L6Q2WGJ9 1857 aa27.42■■□□□ 1.98
NXT1-201ENST00000254998 ABCC4O15439 1325 aa27.41■■□□□ 1.98
NXT1-201ENST00000254998 LTBP3Q9NS15 1303 aa27.41■■□□□ 1.98
NXT1-201ENST00000254998 NFKBIEO00221 500 aa27.41■■□□□ 1.98
NXT1-201ENST00000254998 ALDH1L1O75891 902 aa27.41■■□□□ 1.98
NXT1-201ENST00000254998 DDX46Q7L014 1031 aaKnown RBP27.41■■□□□ 1.98
NXT1-201ENST00000254998 ZNF219Q9P2Y4 722 aaPredicted RBP27.41■■□□□ 1.98
NXT1-201ENST00000254998 CCDC93Q567U6 631 aa27.4■■□□□ 1.98
NXT1-201ENST00000254998 CC2D2BQ6DHV5 1058 aa27.4■■□□□ 1.98
NXT1-201ENST00000254998 JARID2Q92833 1246 aaPredicted RBP27.4■■□□□ 1.98
NXT1-201ENST00000254998 SBF1O95248 1867 aa27.39■■□□□ 1.98
NXT1-201ENST00000254998 BBOX1O75936 387 aa27.39■■□□□ 1.98
NXT1-201ENST00000254998 CASP7P55210 303 aa27.39■■□□□ 1.98
NXT1-201ENST00000254998 UBE3BQ7Z3V4 1068 aa27.39■■□□□ 1.98
NXT1-201ENST00000254998 RASSF7Q02833 373 aa27.38■■□□□ 1.97
NXT1-201ENST00000254998 GRAPQ13588 217 aa27.38■■□□□ 1.97
NXT1-201ENST00000254998 SLC4A10Q6U841 1118 aa27.38■■□□□ 1.97
NXT1-201ENST00000254998 RTKN2Q8IZC4 609 aa27.38■■□□□ 1.97
NXT1-201ENST00000254998 GRAPLQ8TC17 118 aaPredicted RBP27.38■■□□□ 1.97
NXT1-201ENST00000254998 PLA2G12BQ9BX93 195 aa27.38■■□□□ 1.97
NXT1-201ENST00000254998 SRCIN1Q9C0H9 1055 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms