RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 TBC1D31Q96DN5 1066 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 SELENOSQ9BQE4 189 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 STIM2Q9P246 746 aa11.75□□□□□ -0.53
SLF2-201ENST00000238961 MAK16Q9BXY0 300 aaKnown RBP11.74□□□□□ -0.53
SLF2-201ENST00000238961 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 MTHFSP49914 203 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 USP37Q86T82 979 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 MAP3K11Q16584 847 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 IQCA1Q86XH1 822 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 ANKS4BQ8N8V4 417 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 NAPBQ9H115 298 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 CALCOCO1Q9P1Z2 691 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 RABGAP1Q9Y3P9 1069 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 KIF2AO00139 706 aaPredicted RBP11.74□□□□□ -0.53
SLF2-201ENST00000238961 ALDH3A1P30838 453 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 HSPA1LP34931 641 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 TCP11L1Q9NUJ3 509 aa11.74□□□□□ -0.53
SLF2-201ENST00000238961 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 SLC4A8Q2Y0W8 1093 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 BICDL2A1A5D9 508 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
SLF2-201ENST00000238961 INPP1P49441 399 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
SLF2-201ENST00000238961 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 PPP1R12AO14974 1030 aaPredicted RBP11.73□□□□□ -0.53
SLF2-201ENST00000238961 VIMP08670 466 aaKnown RBP11.73□□□□□ -0.53
SLF2-201ENST00000238961 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
SLF2-201ENST00000238961 CDR2Q01850 454 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 PPP1R21Q6ZMI0 780 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 SPAG5Q96R06 1193 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 KRT32Q14532 448 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 DDX27Q96GQ7 796 aaKnown RBP11.73□□□□□ -0.53
SLF2-201ENST00000238961 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
SLF2-201ENST00000238961 PPP6R1Q9UPN7 881 aa11.73□□□□□ -0.53
SLF2-201ENST00000238961 ATP2A2P16615 1042 aaKnown RBP11.72□□□□□ -0.53
SLF2-201ENST00000238961 NACA2Q9H009 215 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 CLSTN2Q9H4D0 955 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 SMIM23A6NLE4 172 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 PPFIA2O75334 1257 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 GNL1P36915 607 aaPredicted RBP11.72□□□□□ -0.53
SLF2-201ENST00000238961 CFAP70Q5T0N1 1121 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 AKNAD1Q5T1N1 836 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 CNNM3Q8NE01 707 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 SSRP1Q08945 709 aaKnown RBP11.72□□□□□ -0.53
SLF2-201ENST00000238961 NAA16Q6N069 864 aaPredicted RBP11.72□□□□□ -0.53
SLF2-201ENST00000238961 SELENOOQ9BVL4 669 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 TRMT1Q9NXH9 659 aaKnown RBP11.72□□□□□ -0.53
SLF2-201ENST00000238961 RRBP1Q9P2E9 1410 aaKnown RBP11.72□□□□□ -0.53
SLF2-201ENST00000238961 CIB2O75838 187 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 ZNF622Q969S3 477 aaKnown RBP eCLIP11.72□□□□□ -0.53
SLF2-201ENST00000238961 TTC14Q96N46 770 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 NOD1Q9Y239 953 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 IFIT1P09914 478 aaKnown RBP11.72□□□□□ -0.53
SLF2-201ENST00000238961 GUCY1B3Q02153 619 aa11.72□□□□□ -0.53
SLF2-201ENST00000238961 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
SLF2-201ENST00000238961 STMN4Q9H169 189 aaPredicted RBP11.71□□□□□ -0.53
SLF2-201ENST00000238961 SLC12A7Q9Y666 1083 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 FAM13AO94988 1023 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
SLF2-201ENST00000238961 GTF3C6Q969F1 213 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 STARD3NLO95772 234 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.53
SLF2-201ENST00000238961 ATRIPQ8WXE1 791 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 KIFC2Q96AC6 838 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 CCDC114Q96M63 670 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 BEGAINQ9BUH8 593 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 GGNBP2Q9H3C7 697 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 ANO10Q9NW15 660 aa11.71□□□□□ -0.53
SLF2-201ENST00000238961 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.54
SLF2-201ENST00000238961 SLC4A2P04920 1241 aa11.71□□□□□ -0.54
SLF2-201ENST00000238961 CEP57Q86XR8 500 aa11.71□□□□□ -0.54
SLF2-201ENST00000238961 ITM2BQ9Y287 266 aa11.71□□□□□ -0.54
SLF2-201ENST00000238961 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.71□□□□□ -0.54
SLF2-201ENST00000238961 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 CATIPQ7Z7H3 387 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 STMN2Q93045 179 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 PPP2R5DQ14738 602 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 ERCC6LQ2NKX8 1250 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 LRRC43Q8N309 656 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 CCDC12Q8WUD4 166 aaPredicted RBP11.7□□□□□ -0.54
SLF2-201ENST00000238961 KCNK9Q9NPC2 374 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 KIF5BP33176 963 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 GTF2A1P52655 376 aaPredicted RBP11.7□□□□□ -0.54
SLF2-201ENST00000238961 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 MSANTD4Q8NCY6 345 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 BAG1Q99933 345 aaPredicted RBP11.7□□□□□ -0.54
SLF2-201ENST00000238961 E7EVH7 732 aa11.7□□□□□ -0.54
SLF2-201ENST00000238961 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
SLF2-201ENST00000238961 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
SLF2-201ENST00000238961 FCHSD2O94868 740 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
SLF2-201ENST00000238961 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 CNGA1P29973 690 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 MAP7Q14244 749 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 ZSWIM4Q9H7M6 989 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 SDCCAG8Q86SQ7 713 aaPredicted RBP11.69□□□□□ -0.54
SLF2-201ENST00000238961 VCX3BQ9H321 246 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 C8orf76Q96K31 380 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms