RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 POU6F2P78424 691 aaPredicted RBP16.34■□□□□ 0.21
CIRBP-227ENST00000590188 SNTB1Q13884 538 aaKnown RBP16.34■□□□□ 0.21
CIRBP-227ENST00000590188 RCAN2Q14206 197 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 HSPB2Q16082 182 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 LSM12Q3MHD2 195 aaKnown RBP16.34■□□□□ 0.21
CIRBP-227ENST00000590188 NSUN5P2Q63ZY6 315 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 AAGABQ6PD74 315 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 UBQLNLQ8IYU4 475 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 OR4C3Q8NH37 302 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 TLCD1Q96CP7 247 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 SPOCK3Q9BQ16 436 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 ENKD1Q9H0I2 346 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 GIN1Q9NXP7 522 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 HAO1Q9UJM8 370 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 ARHGAP21Q5T5U3 1957 aa16.34■□□□□ 0.21
CIRBP-227ENST00000590188 CELSR2Q9HCU4 2923 aa16.33■□□□□ 0.21
CIRBP-227ENST00000590188 GOLGA8QA0A0J9YX86 632 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 GOLGA8OA6NCC3 632 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 GOLGA8NF8WBI6 632 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 SNUPNO95149 360 aaKnown RBP16.33■□□□□ 0.2
CIRBP-227ENST00000590188 IL2RAP01589 272 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 LHX2P50458 406 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 B3GALT5-AS1P59052 145 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 HBA1P69905 142 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 SMU1Q2TAY7 513 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 ANKRD46Q86W74 232 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 C9orf106Q8NAJ2 232 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 RELL2Q8NC24 303 aaPredicted RBP16.33■□□□□ 0.2
CIRBP-227ENST00000590188 OR56A1Q8NGH5 318 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 ADAMTS15Q8TE58 950 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 ARL8AQ96BM9 186 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 DTNBP1Q96EV8 351 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 MEAF6Q9HAF1 191 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 FAF1Q9UNN5 650 aaPredicted RBP16.33■□□□□ 0.2
CIRBP-227ENST00000590188 KCNE3Q9Y6H6 103 aa16.33■□□□□ 0.2
CIRBP-227ENST00000590188 CLCA1A8K7I4 914 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 C9JVG2 144 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 SDHDO14521 159 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 NDUFB5O43674 189 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 CPSF4O95639 269 aaKnown RBP16.32■□□□□ 0.2
CIRBP-227ENST00000590188 CPN1P15169 458 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 CEACAM8P31997 349 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-227ENST00000590188 ZNF136P52737 540 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 DGKQP52824 942 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 CASP9P55211 416 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 RPS26P62854 115 aaKnown RBP16.32■□□□□ 0.2
CIRBP-227ENST00000590188 SF3B4Q15427 424 aaKnown RBP eCLIP16.32■□□□□ 0.21e-11■■■■■ 56.7
CIRBP-227ENST00000590188 SLC25A35Q3KQZ1 300 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 EXOSC6Q5RKV6 272 aaKnown RBP16.32■□□□□ 0.2
CIRBP-227ENST00000590188 CDC73Q6P1J9 531 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 ZCCHC12Q6PEW1 402 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 NATD1Q8N6N6 113 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 OR5D16Q8NGK9 328 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 OR4A15Q8NGL6 344 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 FAM110BQ8TC76 370 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 SMPDL3BQ92485 455 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 SH3YL1Q96HL8 342 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-227ENST00000590188 BTBD2Q9BX70 525 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 ACTRT3Q9BYD9 372 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 PIGUQ9H490 435 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 WDR55Q9H6Y2 383 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-227ENST00000590188 PTGES2Q9H7Z7 377 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 NEUROD4Q9HD90 331 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 THAP1Q9NVV9 213 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 GPATCH2Q9NW75 528 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 VDAC3Q9Y277 283 aa16.32■□□□□ 0.2
CIRBP-227ENST00000590188 PKDREJQ9NTG1 2253 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 HCFC1P51610 2035 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 CD8B2A6NJW9 211 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 H0YC42 278 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 H3BML4 177 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 DVL2O14641 736 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 SEC14L5O43304 696 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 SNNO75324 88 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-227ENST00000590188 ALDOCP09972 364 aaKnown RBP16.31■□□□□ 0.2
CIRBP-227ENST00000590188 HPGDP15428 266 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 POU3F2P20265 443 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-227ENST00000590188 EPHA3P29320 983 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 TIMP3P35625 211 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 TPD52P55327 224 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-227ENST00000590188 CLDN18P56856 261 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 C21orf58P58505 322 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 C17orf67Q0P5P2 114 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.31■□□□□ 0.2
CIRBP-227ENST00000590188 ATG16L1Q676U5 607 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 ARSKQ6UWY0 536 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 CAMKMTQ7Z624 323 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 KIRREL3Q8IZU9 778 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 PSMA8Q8TAA3 256 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 ZPLD1Q8TCW7 415 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 SFXN5Q8TD22 340 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 C1GALT1C1Q96EU7 318 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 STACQ99469 402 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 G6PC3Q9BUM1 346 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 MANSC1Q9H8J5 431 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 MRPS18CQ9Y3D5 142 aaKnown RBP16.31■□□□□ 0.2
CIRBP-227ENST00000590188 NOTCH2Q04721 2471 aa16.31■□□□□ 0.2
CIRBP-227ENST00000590188 RNF103-CHMP3A0A140T963 221 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 MBD3L4A6NDZ8 208 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-227ENST00000590188 MBD3L3A6NE82 208 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms