RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 A0A1W2PRB8 838 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 H3BML4 177 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 SYT5O00445 386 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 SEC14L5O43304 696 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 NKX2-2O95096 273 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 ANGPTL1O95841 491 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 IGKV1D-16P01601 117 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 ALOX5P09917 674 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 ACP2P11117 423 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 LAMP1P11279 417 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 ZNF708P17019 499 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 PRIM2P49643 509 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 CLDN18P56856 261 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 PRR5P85299 388 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 FOXF2Q12947 444 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 STX3Q13277 289 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 GANABQ14697 944 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 CASP8Q14790 479 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 SPDYE7PQ495Y7 208 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 CPTPQ5TA50 214 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 MFSD12Q6NUT3 480 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 POMZP3Q6PJE2 187 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 GCNT2Q8N0V5 402 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 COX18Q8N8Q8 333 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 GATSQ8NAP1 163 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 SLC16A11Q8NCK7 471 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 SMPDL3BQ92485 455 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 INTS12Q96CB8 462 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 TLCD1Q96CP7 247 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 GIMAP5Q96F15 307 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 C16orf58Q96GQ5 468 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 ATAD3AQ9NVI7 634 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 PNPOQ9NVS9 261 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 CRIM1Q9NZV1 1036 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 ATP6V1HQ9UI12 483 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 EIF3LQ9Y262 564 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 ABCA12Q86UK0 2595 aa11.5□□□□□ -0.57
NPLOC4-213ENST00000573519 DCHS2Q6V1P9 2916 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 ARHGAP21Q5T5U3 1957 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 PDZD2O15018 2839 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 CFLARO15519 480 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 NDUFB5O43674 189 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 KCNK2O95069 426 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 PEPDP12955 493 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 HPGDP15428 266 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 PEX19P40855 299 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 CPA2P48052 419 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 B3GALT5-AS1P59052 145 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 C17orf67Q0P5P2 114 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 BST1Q10588 318 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 TP53BP2Q13625 1128 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 DUSP5Q16690 384 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 CCNJQ5T5M9 372 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 LUZP2Q86TE4 346 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 MEIOBQ8N635 442 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 KRTCAP2Q8N6L1 136 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 WNT2BQ93097 391 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 ARL8AQ96BM9 186 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 FAM120BQ96EK7 910 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 C1GALT1C1Q96EU7 318 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 PRPF18Q99633 342 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 G6PC3Q9BUM1 346 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 AKTIPQ9H8T0 292 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 CLCF1Q9UBD9 225 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 FOXD3Q9UJU5 478 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 RAP2CQ9Y3L5 183 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 ZNF337Q9Y3M9 751 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 ADGRG4Q8IZF6 3080 aa11.49□□□□□ -0.57
NPLOC4-213ENST00000573519 SHISA8B8ZZ34 492 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 RCBTB2O95199 551 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 OXSR1O95747 527 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 C6orf47O95873 294 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 HMGN2P05204 90 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 G6PDP11413 515 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 MAP3K8P41279 467 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 CCT3P49368 545 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 RPL14P50914 215 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 POU6F2P78424 691 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 MAD2L1Q13257 205 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 LASP1Q14847 261 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 MLC1Q15049 377 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 BCL2A1Q16548 175 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 PGS1Q32NB8 556 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 FBXL19-AS1Q494R0 122 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 FLYWCH1Q4VC44 716 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 FBXW10Q5XX13 1052 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 PPP4R4Q6NUP7 873 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 ZCCHC12Q6PEW1 402 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 APOOLQ6UXV4 268 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 ADGRE4PQ86SQ3 457 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 KIF18BQ86Y91 864 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 OR4C3Q8NH37 302 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 OR5P2Q8WZ92 322 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 NRGNQ92686 78 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 HOXB13Q92826 284 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 CDS1Q92903 461 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 ZFP3Q96NJ6 502 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 PIGQQ9BRB3 760 aa11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 GPATCH1Q9BRR8 931 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-213ENST00000573519 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms