RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RFPL4BQ6ZWI9 263 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 TRMT10CQ7L0Y3 403 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ADAMTSL2Q86TH1 951 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ASPGQ86U10 573 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ZFAND4Q86XD8 727 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 LAX1Q8IWV1 398 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 THEM5Q8N1Q8 247 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 LINC00469Q8N7U9 141 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MRPL43Q8N983 215 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 FAM133AQ8N9E0 248 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 OR9Q2Q8NGE9 314 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 OR10G7Q8NGN6 311 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 RNASE8Q8TDE3 154 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ADAMTS16Q8TE57 1224 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 TRUB1Q8WWH5 349 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF75CPQ92670 426 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC45A3Q96JT2 553 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 SPATA13Q96N96 652 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 GUCD1Q96NT3 240 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 PSKH2Q96QS6 385 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 CCM2Q9BSQ5 444 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 PAPOLGQ9BWT3 736 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 SPZ1Q9BXG8 430 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 Q9H521 79 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 PRMT8Q9NR22 394 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 KCNN3Q9UGI6 736 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 RSL24D1Q9UHA3 163 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 LGALS13Q9UHV8 139 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 TEKT2Q9UIF3 430 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ATPIF1Q9UII2 106 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 LAMP5Q9UJQ1 280 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 RAB26Q9ULW5 256 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 KCNK6Q9Y257 313 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 FOXA2Q9Y261 457 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 RPH3AQ9Y2J0 694 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 TMED7Q9Y3B3 224 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ZHX2Q9Y6X8 837 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MYH7P12883 1935 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 DLG5Q8TDM6 1919 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC37A3O60309 1634 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 PTPRMP28827 1452 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MAP3K19Q56UN5 1328 aa3.21□□□□□ -1.89
ECHDC1-217ENST00000488087 ADGRA3Q8IWK6 1321 aa3.21□□□□□ -1.89
ECHDC1-217ENST00000488087 KIF1BO60333 1816 aa3.21□□□□□ -1.89
ECHDC1-217ENST00000488087 KIAA1217Q5T5P2 1943 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 A0A0D9SFI3 127 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 GOLGA8QA0A0J9YX86 632 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MACROD2A1Z1Q3 448 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 GOLGA8OA6NCC3 632 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 C5orf51A6NDU8 294 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ZSCAN5CA6NGD5 496 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KRTAP16-1A8MUX0 517 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MIF4GDA9UHW6 222 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 GOLGA8NF8WBI6 632 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 G3V2L1 256 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 GOLGA8RI6L899 631 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PGRMC1O00264 195 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KPNA4O00629 521 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MCF2LO15068 1137 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MAGEB3O15480 346 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 RNF113AO15541 343 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 TLX2O43763 284 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KRT75O95678 551 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PTBP3O95758 552 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CRYZL1O95825 349 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 IFNB1P01574 187 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 S100A6P06703 90 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 HEXBP07686 556 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 HOXB7P09629 217 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ZCCHC18P0CG32 403 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 TAC1P20366 129 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PKLRP30613 574 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CAPGP40121 348 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MAGEA1P43355 309 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 EIF2B2P49770 351 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 NDST2P52849 883 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 VCPP55072 806 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ERVK-16P61578 105 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 S100A12P80511 92 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CDK16Q00536 496 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 IL9RQ01113 521 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KLRC3Q07444 240 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CNTN1Q12860 1018 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 TSTA3Q13630 321 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KIAA0141Q14154 515 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 GCKRQ14397 625 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 OXA1LQ15070 435 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PDK1Q15118 436 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PDK3Q15120 406 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KCNJ8Q15842 424 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MOGQ16653 247 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MS4A18Q3C1V0 323 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 RABL6Q3YEC7 729 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 NADK2Q4G0N4 442 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 DNAL1Q4LDG9 190 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PLPP4Q5VZY2 271 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PAQR6Q6TCH4 344 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KDELC1Q6UW63 502 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 IZUMO2Q6UXV1 221 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 C4orf22Q6V702 233 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms