RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RBMS3Q6XE24 437 aaKnown RBP3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 RFLNAQ6ZTI6 216 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 PID1Q7Z2X4 250 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TRPT1Q86TN4 253 aaKnown RBP3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TMEM139Q8IV31 216 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF567Q8N184 647 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 SFRP1Q8N474 314 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 ARL14Q8N4G2 192 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TTC30BQ8N4P2 665 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 RNF10Q8N5U6 811 aaKnown RBP3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TRAM1L1Q8N609 369 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 AVL9Q8NBF6 648 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 GPR26Q8NDV2 337 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TRIM58Q8NG06 486 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR2T12Q8NG77 320 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR4D9Q8NGE8 314 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCL4L1Q8NHW4 92 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 WDR20Q8TBZ3 569 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 BRSK1Q8TDC3 778 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 HTR3CQ8WXA8 447 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 KRT35Q92764 455 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 GLYATL1Q969I3 302 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 ATXN7L3BQ96GX2 97 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 AGAP3Q96P47 875 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 PPP1R2P1Q96PQ5 205 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 QKIQ96PU8 341 aaKnown RBP eCLIP3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 SMIM14Q96QK8 99 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR2M4Q96R27 311 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR6C1Q96RD1 312 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 F2RL3Q96RI0 385 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 PSD2Q9BQI7 771 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 FERMT1Q9BQL6 677 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TIMM29Q9BSF4 260 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TEX12Q9BXU0 123 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 OSBPL8Q9BZF1 889 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 STRADBQ9C0K7 418 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCDC68Q9H2F9 335 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 DPEP2Q9H4A9 486 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRORYQ9H606 182 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 UCK1Q9HA47 277 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 SMOXQ9NWM0 555 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 NSMCE4AQ9NXX6 385 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 IL17CQ9P0M4 197 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF624Q9P2J8 865 aaPredicted RBP3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 CD84Q9UIB8 345 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 PCDHGB4Q9UN71 923 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 SATB2Q9UPW6 733 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF148Q9UQR1 794 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 HYOU1Q9Y4L1 999 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 TTLL3Q9Y4R7 772 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 RNF215Q9Y6U7 377 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 FER1L5A0AVI2 2057 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 MED13Q9UHV7 2174 aa3.27□□□□□ -1.89
CKS1BP3-201ENST00000600888 MDC1Q14676 2089 aaKnown RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF462Q96JM2 2506 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 LOC100509620A0A075B734 347 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 IGHV1OR21-1A0A087WYE8 117 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 BLOC1S5-TXNDC5H3BN57 136 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 H7C0S8 307 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 K7ENP7 123 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 GAPDHSO14556 408 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 KMOO15229 486 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 CASC3O15234 703 aaKnown RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 INPP4BO15327 924 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 TOX3O15405 576 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ANXA9O76027 345 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 TNFSF15O95150 251 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC25A14O95258 325 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ANKRD34CP0C6C1 535 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 IGHV4-38-2P0DP08 117 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ERVK-10P10266 1014 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 THRAP10827 490 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ACP2P11117 423 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 LIPCP11150 499 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF7P17097 686 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 PSMA3P25788 255 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 EPHA2P29317 976 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ADRA1AP35348 466 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A5P35504 534 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 GEMP55040 296 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 MAZP56270 477 aaKnown RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 RPS18P62269 152 aaKnown RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 DYNLT1P63172 113 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 UBE2IP63279 158 aaKnown RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 OTUD4Q01804 1114 aaKnown RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 DMPKQ09013 629 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRKG2Q13237 762 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 MSLNQ13421 630 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ITGA9Q13797 1035 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC1A5Q15758 541 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 NTRK2Q16620 822 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 IGSF11Q5DX21 431 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 KCTD11Q693B1 232 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 DHRS7BQ6IAN0 325 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 CFAP161Q6P656 301 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 WDR74Q6RFH5 385 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 GSG1LQ6UXU4 331 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 PEX26Q7Z412 305 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 ARHGAP22Q7Z5H3 698 aa3.26□□□□□ -1.89
CKS1BP3-201ENST00000600888 PLD3Q8IV08 490 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms