RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 TRAF6Q9Y4K3 522 aa14.37□□□□□ -0.11
CRLF3-203ENST00000578692 LSM1O15116 133 aaKnown RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 NPHS1O60500 1241 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 KCNH1O95259 989 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 CHRNGP07510 517 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 NUDT17P0C025 328 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 PRKAG1P54619 331 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 RPL38P63173 70 aaKnown RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 EEF1A1P68104 462 aaKnown RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 SORDQ00796 357 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 STX5Q13190 355 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 GANABQ14697 944 aaKnown RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 UGT3A2Q3SY77 523 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 GALNTL6Q49A17 601 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 ZNF385BQ569K4 471 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 ARL13AQ5H913 290 aaPredicted RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 EEF1A1P5Q5VTE0 462 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 LUZP2Q86TE4 346 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 GRAMD2AQ8IUY3 354 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 DDIASQ8IXT1 998 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 GCNT2Q8N0V5 402 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 NUP43Q8NFH3 380 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 ZFP28Q8NHY6 868 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 GPR151Q8TDV0 419 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 PIK3R3Q92569 461 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 NINJ1Q92982 152 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 ZBED6CLQ96FA7 236 aaPredicted RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 FAM111AQ96PZ2 611 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 RBM24Q9BX46 236 aaKnown RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 LIME1Q9H400 295 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 EML4Q9HC35 981 aaKnown RBP14.36□□□□□ -0.11
CRLF3-203ENST00000578692 EQTNQ9NQ60 294 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 SLC17A7Q9P2U7 560 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 PCNX3Q9H6A9 2034 aa14.36□□□□□ -0.11
CRLF3-203ENST00000578692 GXYLT2A0PJZ3 443 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 LINC01387J3KSC0 135 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 HCRTR2O43614 444 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 SPAG7O75391 227 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 UTS2O95399 124 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 TGM6O95932 706 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 MAP3K8P41279 467 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 FRKP42685 505 aaPredicted RBP14.35□□□□□ -0.11
CRLF3-203ENST00000578692 IFFO1Q0D2I5 559 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 C17orf67Q0P5P2 114 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 PDE7AQ13946 482 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 VPS26BQ4G0F5 336 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 RAET1LQ5VY80 246 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 P4HA3Q7Z4N8 544 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 EXOC3L1Q86VI1 746 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 CDC20BQ86Y33 519 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 UBQLNLQ8IYU4 475 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 MEIOBQ8N635 442 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 CLHC1Q8NHS4 586 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 TWIST2Q8WVJ9 160 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 HOXB13Q92826 284 aaPredicted RBP14.35□□□□□ -0.11
CRLF3-203ENST00000578692 MECRQ9BV79 373 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 TBL1XR1Q9BZK7 514 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 ROPN1BQ9BZX4 212 aaPredicted RBP14.35□□□□□ -0.11
CRLF3-203ENST00000578692 PIGMQ9H3S5 423 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 ROPN1Q9HAT0 212 aaPredicted RBP14.35□□□□□ -0.11
CRLF3-203ENST00000578692 ACSS1Q9NUB1 689 aaPredicted RBP14.35□□□□□ -0.11
CRLF3-203ENST00000578692 CCM2LQ9NUG4 571 aaPredicted RBP14.35□□□□□ -0.11
CRLF3-203ENST00000578692 NTMQ9P121 344 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 ST6GALNAC2Q9UJ37 374 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 EDARQ9UNE0 448 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 ZNF337Q9Y3M9 751 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 ANKRD17O75179 2603 aaKnown RBP14.35□□□□□ -0.11
CRLF3-203ENST00000578692 MPDZO75970 2070 aa14.35□□□□□ -0.11
CRLF3-203ENST00000578692 TMEM233B4DJY2 109 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 NKX2-2O95096 273 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 ANGPTL1O95841 491 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 IGKV1D-16P01601 117 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 BCKDHAP12694 445 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 ASMTP46597 345 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 CPA2P48052 419 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 DIO3P55073 304 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 EEFSECP57772 596 aaKnown RBP14.34□□□□□ -0.11
CRLF3-203ENST00000578692 VSNL1P62760 191 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 PRR5P85299 388 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 GLYR1Q49A26 553 aaPredicted RBP14.34□□□□□ -0.11
CRLF3-203ENST00000578692 FBXW10Q5XX13 1052 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 APOOLQ6UXV4 268 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 CDRT4Q8N9R6 151 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 TCP10LQ8TDR4 215 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 SLC9A6Q92581 669 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 MTERF3Q96E29 417 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 RMND5BQ96G75 393 aaPredicted RBP14.34□□□□□ -0.11
CRLF3-203ENST00000578692 PIGQQ9BRB3 760 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 GALNT8Q9NY28 637 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 LGALS13Q9UHV8 139 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 MED12LQ86YW9 2145 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 CCDC168Q8NDH2 2452 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 OR2M5A3KFT3 312 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 A8MXE2 369 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 PIP5K1BO14986 540 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 EMC8O43402 210 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 CRHP06850 196 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 SUCLG1P53597 346 aaKnown RBP14.34□□□□□ -0.11
CRLF3-203ENST00000578692 CLDN15P56746 228 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms