RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 IL23RQ5VWK5 629 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 FIGNL1Q6PIW4 674 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 LACC1Q8IV20 430 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 NUDCD3Q8IVD9 361 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 ZZZ3Q8IYH5 903 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 PM20D2Q8IYS1 436 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 ZNF781Q8N8C0 355 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 SLC16A11Q8NCK7 471 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 OR2M3Q8NG83 312 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 OR4K17Q8NGC6 315 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 DUSP19Q8WTR2 217 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 SLC9A6Q92581 669 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 METTL2AQ96IZ6 378 aaKnown RBP9.62□□□□□ -0.87
NELFE-213ENST00000494956 SFXN2Q96NB2 322 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 ZIM3Q96PE6 472 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 SH3GL2Q99962 352 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 CENPHQ9H3R5 247 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 EML4Q9HC35 981 aaKnown RBP9.62□□□□□ -0.87
NELFE-213ENST00000494956 MCCC2Q9HCC0 563 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 WBP11Q9Y2W2 641 aaKnown RBP9.62□□□□□ -0.87
NELFE-213ENST00000494956 L3MBTL1Q9Y468 752 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 POLQO75417 2590 aa9.62□□□□□ -0.87
NELFE-213ENST00000494956 MBD3L4A6NDZ8 208 aaPredicted RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 MBD3L3A6NE82 208 aaPredicted RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 MBD3L5A6NJ08 208 aaPredicted RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 CD8B2A6NJW9 211 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 ENO4A6NNW6 628 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 ESPNB1AK53 854 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 SCAMP2O15127 329 aaKnown RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 CTIFO43310 598 aaKnown RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 TBX19O60806 448 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 NKX2-2O95096 273 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 TGM6O95932 706 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 HK1P19367 917 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 BGNP21810 368 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 TIMP3P35625 211 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 MAP3K8P41279 467 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 SUCLG1P53597 346 aaKnown RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 CLDN15P56746 228 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 MRPS22P82650 360 aaKnown RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 ZNHIT3Q15649 155 aaPredicted RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 CHI3L2Q15782 390 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 PDCD2Q16342 344 aaPredicted RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 DUSP5Q16690 384 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 CEP85LQ5SZL2 805 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 ARSKQ6UWY0 536 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 TMEM200AQ86VY9 491 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 UBQLNLQ8IYU4 475 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 GCNT2Q8N0V5 402 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 FADS6Q8N9I5 356 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 FNDC5Q8NAU1 212 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 OR4C3Q8NH37 302 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 ZFP28Q8NHY6 868 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 MBD3L2Q8NHZ7 208 aaPredicted RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 PPP1R14CQ8TAE6 165 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 INTS12Q96CB8 462 aaKnown RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 TUBGCP3Q96CW5 907 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 FAM120BQ96EK7 910 aaKnown RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 ZBED6CLQ96FA7 236 aaPredicted RBP9.61□□□□□ -0.87
NELFE-213ENST00000494956 PPP3R2Q96LZ3 170 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 ZNF559Q9BR84 538 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 CRIM1Q9NZV1 1036 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 CLCF1Q9UBD9 225 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 ATP6V1HQ9UI12 483 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 RAB21Q9UL25 225 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 TMED5Q9Y3A6 229 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 KCNE3Q9Y6H6 103 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 MYO9AB2RTY4 2548 aa9.61□□□□□ -0.87
NELFE-213ENST00000494956 NPIPA5A0A0B4J1W7 369 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 A0A1W2PRB8 838 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 EEF1E1-BLOC1S5C9J1V9 151 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 NPIPA7E9PJI5 369 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 DVL2O14641 736 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 SEC14L5O43304 696 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 EEF1E1O43324 174 aaKnown RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 EMC8O43402 210 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 SLITRK5O94991 958 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 KCNK2O95069 426 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 HSPA4LO95757 839 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 ANGPTL1O95841 491 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 C6orf47O95873 294 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 OPN1LWP04000 364 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 NPIPA8P0DM63 369 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 TMIGD3P0DMS9 266 aaPredicted RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 G6PDP11413 515 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 CPN1P15169 458 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 ZNF708P17019 499 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 POU3F2P20265 443 aaPredicted RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 ASMTP46597 345 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 DGKQP52824 942 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 DSCR4P56555 118 aaPredicted RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 RCAN2Q14206 197 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 ATP6AP1LQ52LC2 224 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 RAET1LQ5VY80 246 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 MFSD12Q6NUT3 480 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 ENPP6Q6UWR7 440 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 ADGRE4PQ86SQ3 457 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 LSRQ86X29 649 aaPredicted RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 CLEC4FQ8N1N0 589 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 OR5AK3PQ8NH89 298 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms