RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ATP6AP1Q15904 470 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 HADHQ16836 314 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 KLHL12Q53G59 568 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 ARMCX4Q5H9R4 360 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SPANXN2Q5MJ10 180 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 ATAD3CQ5T2N8 411 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 KIAA1161Q6NSJ0 714 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SHQ1Q6PI26 577 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 CORO6Q6QEF8 472 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 HACD2Q6Y1H2 254 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 NUP54Q7Z3B4 507 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 P2RY8Q86VZ1 359 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 DHFR2Q86XF0 187 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 AQP12AQ8IXF9 295 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 FAM71AQ8IYT1 594 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 NDUFAF2Q8N183 169 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 STX19Q8N4C7 294 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 CARNMT1Q8N4J0 409 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 NPEPL1Q8NDH3 523 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF555Q8NEP9 628 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC24A4Q8NFF2 622 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 GOT1L1Q8NHS2 421 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 PSMA8Q8TAA3 256 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 LHFPL5Q8TAF8 219 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 OLIG1Q8TAK6 271 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SDR42E1Q8WUS8 393 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SHC3Q92529 594 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 FCGR1BQ92637 280 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 TMIGD2Q96BF3 282 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 RCN3Q96D15 328 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 GLT1D1Q96MS3 346 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 KLF6Q99612 283 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 CITED2Q99967 270 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 RTP3Q9BQQ7 232 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 EBF4Q9BQW3 602 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 NAT9Q9BTE0 207 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCDC32Q9BV29 185 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 THUMPD3Q9BV44 507 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 NYXQ9GZU5 481 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 TMEM117Q9H0C3 514 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 DPEP3Q9H4B8 488 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 TFB2MQ9H5Q4 396 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 ATP13A3Q9H7F0 1226 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 COQ10BQ9H8M1 238 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 FANCEQ9HB96 536 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 TUFT1Q9NNX1 390 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 UBE2TQ9NPD8 197 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 GKN1Q9NS71 199 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 FAM118AQ9NWS6 357 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SPHK1Q9NYA1 384 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 MRPL39Q9NYK5 338 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 TAAR2Q9P1P5 351 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 PAK5Q9P286 719 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 POLLQ9UGP5 575 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 MAD2L2Q9UI95 211 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRMT6Q9UJA5 497 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 NOCTQ9UK39 431 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 ADAM28Q9UKQ2 775 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 KIAA1257Q9ULG3 409 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SNX7Q9UNH6 387 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 NIP7Q9Y221 180 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 MRPL11Q9Y3B7 192 aaKnown RBP4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 RNF11Q9Y3C5 154 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 POMT1Q9Y6A1 747 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SSC5DA1L4H1 1573 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 SIP14410 1827 aa4.04□□□□□ -1.76
HMGB1P16-201ENST00000447155 PTPRJQ12913 1337 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TSC2P49815 1807 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 A0A1B0GW55 424 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 A0A1W2PRG6 482 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TCRBV3S1A0A5B6 114 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DHRS12A0PJE2 317 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR6C76A6NM76 312 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 C12orf71A8MTZ7 269 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 GOLGA8SH3BPF8 625 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 EEF2KO00418 725 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 HDAC3O15379 428 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 CFLARO15519 480 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PRKAB2O43741 272 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC37A4O43826 429 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 UGT2B11O75310 529 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 TDP2O95551 362 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 RPS17P08708 135 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUX4L2P0CJ85 424 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUX4L3P0CJ86 424 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUX4L4P0CJ87 422 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUX4L5P0CJ88 424 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUX4L6P0CJ89 424 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 DUX4L7P0CJ90 424 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 HAPLN1P10915 354 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 UMPSP11172 480 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PDGFRAP16234 1089 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 AZGP1P25311 298 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SSTR1P30872 391 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 PTGER4P35408 488 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 SOX6P35712 828 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 HTR2BP41595 481 aa4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 RPS9P46781 194 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 RPS5P46782 204 aaKnown RBP4.03□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR3A3P47888 321 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms