RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MSLNQ13421 630 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 CHRNA6Q15825 494 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 QRICH1Q2TAL8 776 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TEX44Q53QW1 395 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 FASTKD1Q53R41 847 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TECRLQ5HYJ1 363 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 WDR38Q5JTN6 314 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 RABGAP1LQ5R372 815 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 C1orf220Q5T0J3 134 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ERICH5Q6P6B1 374 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 NCCRP1Q6ZVX7 275 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC47A2Q86VL8 602 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 NUDCD3Q8IVD9 361 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 C4orf19Q8IY42 314 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 PM20D2Q8IYS1 436 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 C4orf33Q8N1A6 199 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 CPSF7Q8N684 471 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 STPG4Q8N801 248 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 C17orf47Q8NEP4 570 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 OR7G3Q8NG95 312 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 OCC1Q8TAD7 63 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 DTX3LQ8TDB6 740 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 PPP4R1Q8TF05 950 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TM9SF4Q92544 642 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC35B4Q969S0 331 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 HDAC11Q96DB2 347 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZBED3Q96IU2 234 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF597Q96LX8 424 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 DOK1Q99704 481 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 LITAFQ99732 161 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 COQ7Q99807 217 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 FERMT1Q9BQL6 677 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 NAT9Q9BTE0 207 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 OSBPL11Q9BXB4 747 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 BBS2Q9BXC9 721 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TEKT3Q9BXF9 490 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC2A11Q9BYW1 496 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 RTN4RQ9BZR6 473 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 DRC3Q9H069 523 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC26A1Q9H2B4 701 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ADNPQ9H2P0 1102 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 VCX2Q9H322 139 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 PIGMQ9H3S5 423 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 EXO5Q9H790 373 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 UCK1Q9HA47 277 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TUBG2Q9NRH3 451 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ETNK2Q9NVF9 386 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 DNAJC17Q9NVM6 304 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 FKBP14Q9NWM8 211 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 PAK5Q9P286 719 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 CRNNQ9UBG3 495 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRPC4Q9UBN4 977 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 DCDC2Q9UHG0 476 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ATPIF1Q9UII2 106 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 GNPTGQ9UJJ9 305 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 FBXW2Q9UKT8 454 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 POMPQ9Y244 141 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 AP4B1Q9Y6B7 739 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 COL2A1P02458 1487 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ROBO1Q9Y6N7 1651 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A087WV48 116 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A087WZY1 265 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 LOC102723996A0A087X1L8 192 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRSS51A0A1B0GVH4 220 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 C2orf92A0A1B0GVN3 265 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 FAM230AA0A1W2PPH8 454 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARHGAP42A6NI28 874 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ANXA2P2A6NMY6 339 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 IQCF5A8MTL0 148 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMEM114B3SHH9 223 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 GOLGA8TH3BQL2 631 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 APOC4-APOC2K7ER74 178 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 LGALS8O00214 317 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PLK4O00444 970 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 LSM1O15116 133 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SMAD9O15198 467 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC22A1O15245 554 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 OGTO15294 1046 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZG16O60844 167 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 GLRA3O75311 464 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINB7O75635 380 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PDE5AO76074 875 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 H6PDO95479 791 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CXCL14O95715 111 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 LDLRP01130 860 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PIGRP01833 764 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 APOC2P02655 101 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CSF2P04141 144 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CRYGCP07315 174 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ALOX5P09917 674 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRIM49P0CI25 452 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRIM49CP0CI26 452 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CLUP10909 449 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRPS2P11908 318 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 KRT3P12035 628 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PSMC3P17980 439 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ADRA2CP18825 462 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TPSB2P20231 275 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ACADLP28330 430 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms