RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TBK1Q9UHD2 729 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 RUVBL1Q9Y265 456 aaKnown RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 NPIPA5A0A0B4J1W7 369 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 GLYATL1P3A0A0U1RQE8 302 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CCDC189A1A4V9 331 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 LRRC3CA6NJW4 275 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 SMIM23A6NLE4 172 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 B4DSR2 109 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 NPIPA7E9PJI5 369 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 H0YGG7 62 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 EIF3FO00303 357 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 PRMT5O14744 637 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TM9SF1O15321 606 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 STX7O15400 261 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 RGS16O15492 202 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 PIP5K1CO60331 668 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TRAPPC6AO75865 159 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CGAP01215 116 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 GSTA1P08263 222 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 INHBAP08476 426 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 RPS17P08708 135 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 NPIPA8P0DM63 369 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 PKMP14618 531 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CD1DP15813 335 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CHN1P15882 459 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ALOX15P16050 662 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ADRA2CP18825 462 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 KRT4P19013 534 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 EPORP19235 508 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 FPR2P25090 351 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 GDF1P27539 372 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 AOAHP28039 575 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ATP5DP30049 168 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 AKT1P31749 480 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 LSP1P33241 339 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TTKP33981 857 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 SPRP35270 261 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 MDH1P40925 334 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 MSH2P43246 934 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TTPAP49638 278 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CLCN2P51788 898 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CDH11P55287 796 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 RAB10P61026 200 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ARF3P61204 181 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 PLOD1Q02809 727 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 EGR3Q06889 387 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 BSPH1Q075Z2 132 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ILF2Q12905 390 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 BAMBIQ13145 260 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 RUNX2Q13950 521 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 GRB7Q14451 532 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 OR4D1Q15615 310 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 SF1Q15637 639 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 PDK4Q16654 411 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 LDLRAP1Q5SW96 308 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 FOXB2Q5VYV0 432 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ZDHHC20Q5W0Z9 365 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 FAM219BQ5XKK7 198 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 FAM45BPQ6NSW5 357 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CASC4Q6P4E1 433 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 SUSD1Q6UWL2 747 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 SPATC1Q76KD6 591 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 MAVSQ7Z434 540 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CCDC91Q7Z6B0 441 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ISCA2Q86U28 154 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TAX1BP1Q86VP1 789 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 VRK3Q8IV63 474 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CLDN19Q8N6F1 224 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TEX29Q8N6K0 151 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ZNF540Q8NDQ6 660 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 PLPP5Q8NEB5 264 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 NFAM1Q8NET5 270 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 OR9A4Q8NGU2 314 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 FAM45AQ8TCE6 357 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TCP10LQ8TDR4 215 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 UBTD2Q8WUN7 234 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 CKAP2Q8WWK9 683 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 SREK1Q8WXA9 508 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 STON2Q8WXE9 905 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ABTB1Q969K4 478 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ZUFSPQ96AP4 578 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ZNF845Q96IR2 970 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 JSRP1Q96MG2 331 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 LRRC37BQ96QE4 947 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 NDNQ99608 321 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ACTR6Q9GZN1 396 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 DERL2Q9GZP9 239 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 TNFRSF12AQ9NP84 129 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 DUSP13Q9UII6 198 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ZNF225Q9UK10 706 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 ADAM30Q9UKF2 790 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 RUVBL2Q9Y230 463 aaKnown RBP4.37□□□□□ -1.71
ERCC1-216ENST00000592444 DHRS7Q9Y394 339 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 COMMD10Q9Y6G5 202 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 SCN3AQ9NY46 2000 aa4.37□□□□□ -1.71
ERCC1-216ENST00000592444 A0A096LPK6 155 aa4.36□□□□□ -1.71
ERCC1-216ENST00000592444 IQANK1A0A1B0GTG1 560 aa4.36□□□□□ -1.71
ERCC1-216ENST00000592444 WI2-2373I1.2A0A1W2PRP0 233 aa4.36□□□□□ -1.71
ERCC1-216ENST00000592444 KLHL33A6NCF5 533 aa4.36□□□□□ -1.71
ERCC1-216ENST00000592444 DPRXA6NFQ7 191 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms