RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	BANF1	O75531	89 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SCEL	O95171	688 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	AHSG	P02765	367 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GBA	P04062	536 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GSTP1	P09211	210 aa	Known RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	RHOXF2B	P0C7M4	288 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PEPD	P12955	493 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PSMB1	P20618	241 aa	Known RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ZNF10	P21506	573 aa	Predicted RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GRK2	P25098	689 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TTK	P33981	857 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SSR2	P43308	183 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NR4A2	P43354	598 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KCNC1	P48547	511 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	VPS41	P49754	854 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NAP1L1	P55209	391 aa	Known RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	DSCR9	P59020	149 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MGAT2	Q10469	447 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KIF5A	Q12840	1032 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	RCN2	Q14257	317 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	BCL2A1	Q16548	175 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KRTAP19-4	Q3LI73	84 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	FAM180B	Q6P0A1	224 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TMEM81	Q6P7N7	255 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NUP54	Q7Z3B4	507 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PEG10	Q86TG7	708 aa	Known RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GGN	Q86UU5	652 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GPR180	Q86V85	440 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	LSR	Q86X29	649 aa	Predicted RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GABRG1	Q8N1C3	465 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CCDC89	Q8N998	374 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	OR6K3	Q8NGY3	331 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TMBIM1	Q969X1	311 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ADAD1	Q96M93	576 aa	Known RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KCNC2	Q96PR1	638 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KLHDC3	Q9BQ90	382 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TBCD	Q9BTW9	1192 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	C1QTNF5	Q9BXJ0	243 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NT5DC2	Q9H857	520 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TMEFF2	Q9UIK5	374 aa	Predicted RBP	7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ASB4	Q9Y574	426 aa		7.63	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ESYT3	A0FGR9	886 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	FAM157A	C9JC47	383 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PLPP1	O14494	284 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CLGN	O14967	610 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SS18L1	O75177	396 aa	Predicted RBP	7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ADA	P00813	363 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KRT15	P19012	456 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GNAZ	P19086	355 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	HK1	P19367	917 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ZFP36	P26651	326 aa	Known RBP	7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CETN2	P41208	172 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	IL2	P60568	153 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	LGALS3BP	Q08380	585 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PLCXD2	Q0VAA5	305 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CARTPT	Q16568	116 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	AP5B1	Q2VPB7	878 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	AGAP6	Q5VW22	663 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	RAET1L	Q5VY80	246 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	OR4C11	Q6IEV9	310 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SCIMP	Q6UWF3	145 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SPATA6L	Q8N4H0	392 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CEP112	Q8N8E3	955 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ADCY4	Q8NFM4	1077 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TTL	Q8NG68	377 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	OR2M3	Q8NG83	312 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ANKRD49	Q8WVL7	239 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TANK	Q92844	425 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	VPS39	Q96JC1	886 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	BTBD9	Q96Q07	612 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	EGFL8	Q99944	293 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ESM1	Q9NQ30	184 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CBLN4	Q9NTU7	201 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TAS2R13	Q9NYV9	303 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PTBP2	Q9UKA9	531 aa	Known RBP	7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ZNF175	Q9Y473	711 aa		7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651	EPN1	Q9Y6I3	576 aa	Predicted RBP	7.62	□□□□□ -1.19
NIF3L1-206	ENST00000416651		A0A1W2PR80	420 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SYNDIG1L	A6NDD5	238 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ZNF814	B7Z6K7	855 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SCO2	O43819	266 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CXCL13	O43927	109 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ZNF189	O75820	626 aa	Predicted RBP	7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SLU7	O95391	586 aa	Known RBP	7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CBX7	O95931	251 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SLC35E2B	P0CK96	405 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SLC35E2	P0CK97	266 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PCNA	P12004	261 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TPSB2	P20231	275 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	IL11	P20809	199 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	AGTR1	P30556	359 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	HSPA7	P48741	367 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TMED10	P49755	219 aa	Known RBP	7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CTBP2	P56545	445 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NRG3	P56975	720 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MAP4K2	Q12851	820 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	STX5	Q13190	355 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CDK5R2	Q13319	367 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	DDX39B	Q13838	428 aa	Known RBP	7.61	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms