RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 OR6B2Q6IFH4 312 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SULT1C3Q6IMI6 304 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PLXDC2Q6UX71 529 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 GLDNQ6ZMI3 551 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PIWIL4Q7Z3Z4 852 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARPINQ7Z6K5 226 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF410Q86VK4 478 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TPRA1Q86W33 373 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF573Q86YE8 665 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TICAM1Q8IUC6 712 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINA12Q8IW75 414 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC5A8Q8N695 610 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PACRGLQ8N7B6 248 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 RASGEF1AQ8N9B8 481 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 BHLHE23Q8NDY6 225 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 MCUQ8NE86 351 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 CLHC1Q8NHS4 586 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PHOSPHO2Q8TCD6 241 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PNPT1Q8TCS8 783 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 DNAJA4Q8WW22 397 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 BORCS5Q969J3 196 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SAT2Q96F10 170 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 C14orf79Q96F83 325 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 DYNLL2Q96FJ2 89 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC47A1Q96FL8 570 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 WBP1Q96G27 269 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 C5orf30Q96GV9 206 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TPD52L3Q96J77 140 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 C9orf72Q96LT7 481 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PCDHB18PQ96TA0 734 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 OLFM1Q99784 485 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF577Q9BSK1 485 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 MTG1Q9BT17 334 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 THTPAQ9BU02 230 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TPPP3Q9BW30 176 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TDRD1Q9BXT4 1180 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 NMUR2Q9GZQ4 415 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 RAB6CQ9H0N0 254 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 METTL7AQ9H8H3 244 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 VAT1LQ9HCJ6 419 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SCRT2Q9NQ03 307 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 NUDT15Q9NV35 164 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TUBGCP4Q9UGJ1 667 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 RSL24D1Q9UHA3 163 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRMT6Q9UJA5 497 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 PPIEQ9UNP9 301 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 HBS1LQ9Y450 684 aaKnown RBP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 YIPF1Q9Y548 306 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 TIMM22Q9Y584 194 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 MAB21L2Q9Y586 359 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 AP4S1Q9Y587 144 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 U3KQV3 271 aa3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 SF3B1O75533 1304 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P23-201ENST00000414981 FOCADQ5VW36 1801 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLX4Q8IY92 1834 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 IGLV3-22A0A075B6J6 115 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 hCG_1818297A0A087WSY0 165 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A087WXM4 84 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A1B0GTQ1 180 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A1B0GVG6 124 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A1W2PPM1 405 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A1W2PPW3 197 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TCRBV21S2A2A0A5A6 115 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 HTR3EA5X5Y0 456 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARHGEF35A5YM69 484 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC15A5A6NIM6 579 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 H0Y8G0 127 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC30A4O14863 429 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ST8SIA3O43173 380 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 AKR7A2O43488 359 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SULT1B1O43704 296 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 LANCL1O43813 399 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 DNAJB6O75190 326 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ATP6V1G1O75348 118 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 CLN5O75503 358 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 OR6B1O95007 311 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINE1P05121 402 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 BPGMP07738 259 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 IQCF3P0C7M6 154 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 RALBP11234 206 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 MLNP12872 115 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 POU2F1P14859 743 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TUBG1P23258 451 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ACP1P24666 158 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 NMT1P30419 496 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 HMOX2P30519 316 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDH5P33151 784 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 PCGF2P35227 344 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDKN2BP42772 138 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRMT2P55345 433 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ST8SIA6P61647 398 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 FKBP1AP62942 108 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 RIPPLY1Q0D2K3 151 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ILF2Q12905 390 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRAP1Q12931 704 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ABRQ12979 859 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 SRSF5Q13243 272 aaKnown RBP3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 STX3Q13277 289 aa3.35□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF177Q13360 481 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms