RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	ASPM	Q8IZT6	3477 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	IGKV6-21	A0A0C4DH24	114 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	NKX6-3	A6NJ46	265 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	CCS	O14618	274 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	EXTL3	O43909	919 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	PCDH7	O60245	1069 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	CTDNEP1	O95476	244 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	PTBP3	O95758	552 aa	Known RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	MT-ND2	P03891	347 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	KRT6B	P04259	564 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	DCN	P07585	359 aa	Known RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	CEACAM8	P31997	349 aa	Predicted RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	TNFRSF4	P43489	277 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	KRT6C	P48668	564 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	PITPNB	P48739	271 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	GPR50	Q13585	617 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	SNX1	Q13596	522 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	SQLE	Q14534	574 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	RFPL4B	Q6ZWI9	263 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	NIPA1	Q7RTP0	329 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	PIGZ	Q86VD9	579 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	KIRREL3	Q8IZU9	778 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	ELMOD1	Q8N336	334 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	FBXO30	Q8TB52	745 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	DQX1	Q8TE96	717 aa	Known RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	TBCK	Q8TEA7	893 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	TMEM190	Q8WZ59	177 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	GPR137	Q96N19	417 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	F2RL3	Q96RI0	385 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	MYCBP	Q99417	103 aa	Predicted RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	S1PR3	Q99500	378 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	IL12RB2	Q99665	862 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	LZTS2	Q9BRK4	669 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	NUSAP1	Q9BXS6	441 aa	Known RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	KRTAP4-4	Q9BYR3	166 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	UPF3B	Q9BZI7	483 aa	Known RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	SHARPIN	Q9H0F6	387 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	TMEM231	Q9H6L2	316 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	COPS7A	Q9UBW8	275 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	EPHA6	Q9UF33	1036 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	ETV7	Q9Y603	341 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	SPEG	Q15772	3267 aa		4.96	□□□□□ -1.62
NRXN1-223	ENST00000625891	EP300	Q09472	2414 aa	Predicted RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	NID2	Q14112	1375 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	ATP6AP2	A0A1C7CYW4	349 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	ZNF732	B4DXR9	585 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891		M0QZ92	97 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	ARPC1B	O15143	372 aa	Known RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CYTIP	O60759	359 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	SCGB2A1	O75556	95 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CPNE6	O95741	557 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CLPTM1	O96005	669 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	NGF	P01138	241 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	ODC1	P11926	461 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	AADAC	P22760	399 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CTNNA2	P26232	953 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	GEM	P55040	296 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	MTTP	P55157	894 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	DCDC1	P59894	354 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	DMTN	Q08495	405 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	PDIA5	Q14554	519 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	WSCD2	Q2TBF2	565 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	IL23R	Q5VWK5	629 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CES4A	Q5XG92	561 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CD300LG	Q6UXG3	332 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	TRMT11	Q7Z4G4	463 aa	Known RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	LRRC43	Q8N309	656 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	SLC43A2	Q8N370	569 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	OR6M1	Q8NGM8	313 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	OR13C5	Q8NGS8	318 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	FAM76A	Q8TAV0	307 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	WBP2	Q969T9	261 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	NXPE2	Q96DL1	559 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	BPIFA2	Q96DR5	249 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	LURAP1	Q96LR2	239 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	MBOAT7	Q96N66	472 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	GPA33	Q99795	319 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	NKX3-1	Q99801	234 aa	Predicted RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	PLA2G2F	Q9BZM2	168 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	NXF3	Q9H4D5	531 aa	Known RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	EGLN3	Q9H6Z9	239 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	C2orf42	Q9NWW7	574 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	PLEK2	Q9NYT0	353 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CNOT2	Q9NZN8	540 aa	Known RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	NDUFA13	Q9P0J0	144 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	CGN	Q9P2M7	1197 aa	Known RBP	4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	DUSP12	Q9UNI6	340 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	GAB2	Q9UQC2	676 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	SELENOK	Q9Y6D0	94 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	IKBKG	Q9Y6K9	419 aa		4.95	□□□□□ -1.62
NRXN1-223	ENST00000625891	TICRR	Q7Z2Z1	1910 aa		4.94	□□□□□ -1.62
NRXN1-223	ENST00000625891	OTOGL	Q3ZCN5	2332 aa		4.94	□□□□□ -1.62
NRXN1-223	ENST00000625891		A0A087WZY1	265 aa		4.94	□□□□□ -1.62
NRXN1-223	ENST00000625891		A0A1B0GWJ7	208 aa		4.94	□□□□□ -1.62
NRXN1-223	ENST00000625891	ESYT2	A0FGR8	921 aa		4.94	□□□□□ -1.62
NRXN1-223	ENST00000625891		I3L4J1	428 aa		4.94	□□□□□ -1.62
NRXN1-223	ENST00000625891	DIRAS3	O95661	229 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms