RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 C21orf58P58505 322 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 MRPS22P82650 360 aaKnown RBP12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 ZNF155Q12901 538 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 ZNHIT3Q15649 155 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 PDCD2Q16342 344 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 HIST2H2BCQ6DN03 193 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 ANGPTL8Q6UXH0 198 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 LRRC34Q8IZ02 419 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 KRTCAP2Q8N6L1 136 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 WDSUB1Q8N9V3 476 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 NEIL3Q8TAT5 605 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 RAB3IL1Q8TBN0 382 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 MGARPQ8TDB4 240 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 NUDT8Q8WV74 236 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 HOXB13Q92826 284 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 SARAFQ96BY9 339 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 PRPF18Q99633 342 aaKnown RBP12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 OSBPL11Q9BXB4 747 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 C3orf14Q9HBI5 128 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 Q9N2J8 555 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 PNPLA3Q9NST1 481 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 ATAD3AQ9NVI7 634 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 NKIRAS1Q9NYS0 192 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 NOP53Q9NZM5 478 aaKnown RBP12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 CROCCQ5TZA2 2017 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 MYO7BQ6PIF6 2116 aa12.31□□□□□ -0.44
ARHGEF1-222ENST00000600517 A0A1W2PRB8 838 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 GNB5O14775 395 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 SNPHO15079 494 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 EMC8O43402 210 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 SNNO75324 88 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 CBR3O75828 277 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 TRAPPC6AO75865 159 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 NKX2-2O95096 273 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 COL8A1P27658 744 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 IL12BP29460 328 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 GABRA3P34903 492 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 VPS26BQ4G0F5 336 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 ATG16L1Q676U5 607 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 TMEM211Q6ICI0 200 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 NCCRP1Q6ZVX7 275 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 WDR53Q7Z5U6 358 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 TRIM42Q8IWZ5 723 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 MARVELD2Q8N4S9 558 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 NUP43Q8NFH3 380 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 OR5M9Q8NGP3 310 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 OR1J4Q8NGS1 313 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 PSMA8Q8TAA3 256 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 OR5P2Q8WZ92 322 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 ARL8AQ96BM9 186 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 EFHD2Q96C19 240 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 PPP1R36Q96LQ0 422 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 SLC6A15Q9H2J7 730 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 EXO5Q9H790 373 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 MANSC1Q9H8J5 431 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 GALNT9Q9HCQ5 603 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 KLRF1Q9NZS2 232 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 SPRR3Q9UBC9 169 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 TNFRSF10DQ9UBN6 386 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 MRTO4Q9UKD2 239 aaKnown RBP12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 ACAD8Q9UKU7 415 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 CBLCQ9ULV8 474 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 PCDHGB3Q9Y5G1 929 aa12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 KLF2Q9Y5W3 355 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-222ENST00000600517 EML6Q6ZMW3 1958 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 FADS1O60427 444 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 IL33O95760 270 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 HOXD4P09016 255 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 CYP4B1P13584 511 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 EFNA1P20827 205 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 ACVR2AP27037 513 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 TRPC1P48995 793 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 PRKAG1P54619 331 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 GAS1P54826 345 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 DIO3P55073 304 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 DECR1Q16698 335 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 LSM12Q3MHD2 195 aaKnown RBP12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 EXOSC6Q5RKV6 272 aaKnown RBP12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 WLSQ5T9L3 541 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 ZCCHC12Q6PEW1 402 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 CAMKMTQ7Z624 323 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 PLCZ1Q86YW0 608 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 CDRT4Q8N9R6 151 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 GIMAP5Q96F15 307 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 NUF2Q9BZD4 464 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 BHLHE41Q9C0J9 482 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 MEAF6Q9HAF1 191 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 EQTNQ9NQ60 294 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 SIRT3Q9NTG7 399 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 MAPRE3Q9UPY8 281 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 GTF3C1Q12789 2109 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 NAV2Q8IVL1 2488 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 ZNF407Q9C0G0 2248 aa12.29□□□□□ -0.44
ARHGEF1-222ENST00000600517 GXYLT2A0PJZ3 443 aa12.28□□□□□ -0.44
ARHGEF1-222ENST00000600517 FIGNL2A6NMB9 653 aa12.28□□□□□ -0.44
ARHGEF1-222ENST00000600517 KLF11O14901 512 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms