RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 RGMBQ6NW40 437 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ARMCX2Q7L311 632 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 SLC16A9Q7RTY1 509 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TMCO2Q7Z6W1 182 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FAM71AQ8IYT1 594 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ZCCHC14Q8WYQ9 949 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FRZBQ92765 325 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 UBE2FQ969M7 185 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TGM7Q96PF1 710 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 OR51V1Q9H2C8 321 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 NT5DC2Q9H857 520 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 AKIRIN1Q9H9L7 192 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 A0A0B4J2A0 478 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 FGBP02675 491 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 OR13C7P0DN81 318 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF30P17039 623 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 DGKAP23743 735 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 FBXW4P57775 412 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 OR4D2P58180 307 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 RAP1AP62834 184 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 RASGEF1BQ0VAM2 473 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 TGIF1Q15583 401 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 LGALSLQ3ZCW2 172 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SLC22A6Q4U2R8 563 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 CES4AQ5XG92 561 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 NUP54Q7Z3B4 507 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 HMGN2P46Q86SG4 172 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 GPR78Q96P69 363 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 LMF1Q96S06 567 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ATF6BQ99941 703 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 FN3KQ9H479 309 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 KCNJ16Q9NPI9 418 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SHPKQ9UHJ6 478 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 WTIPA6NIX2 430 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ACOT8O14734 319 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 RGS8P57771 180 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 FOXM1Q08050 763 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SEMA3BQ13214 749 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 FAM174BQ3ZCQ3 159 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 TMEM201Q5SNT2 666 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 JMJD6Q6NYC1 403 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 CCDC190Q86UF4 302 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 LPAR1Q92633 364 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PACRGQ96M98 296 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 MRPL57Q9BQC6 102 aaKnown RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 NIF3L1Q9GZT8 377 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 OR2AG1Q9H205 316 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ZCCHC3Q9NUD5 404 aaKnown RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 DCTN6O00399 190 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 DGAT1O75907 488 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 F3P13726 295 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 CD46P15529 392 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 NDUFA9Q16795 377 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ATP6V1FQ16864 119 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF630Q2M218 657 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 FRMPD2BQ6IN97 320 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PRR27Q6MZM9 219 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 KIAA0319LQ8IZA0 1049 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 C4orf32Q8N8J7 132 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 OR56A4Q8NGH8 313 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 OR14C36Q8NHC7 312 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SLCO4A1Q96BD0 722 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 UBQLN4Q9NRR5 601 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 DDIT4Q9NX09 232 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SEC14L3Q9UDX4 400 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 OR14J1Q9UGF5 321 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PPP1R3CQ9UQK1 317 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 MN1Q10571 1320 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 NUP153P49790 1475 aaKnown RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 A0A0A6YYH2 397 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 A6NJ64 397 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 F6UZH7 168 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 TGFB1I1O43294 461 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PLRG1O43660 514 aaKnown RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 GLP2RO95838 553 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 HEXAP06865 529 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PTPRAP18433 802 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 HEPACAMQ14CZ8 416 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 PPP1R3BQ86XI6 285 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF440Q8IYI8 595 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 EXD3Q8N9H8 876 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 NEIL3Q8TAT5 605 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 CHURC1Q8WUH1 139 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 FCRL3Q96P31 734 aaPredicted RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SNRNP25Q9BV90 132 aaKnown RBP8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 SHARPINQ9H0F6 387 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 EPHA6Q9UF33 1036 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 MAST1Q9Y2H9 1570 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 ITSN2Q9NZM3 1697 aa8.54□□□□□ -1.04
GTF2A1-203ENST00000553612 UPK3BL1B0FP48 263 aa8.53□□□□□ -1.04
GTF2A1-203ENST00000553612 UPK3BL2E5RIL1 263 aa8.53□□□□□ -1.04
GTF2A1-203ENST00000553612 MASP2O00187 686 aa8.53□□□□□ -1.04
GTF2A1-203ENST00000553612 DBIP07108 87 aaKnown RBP8.53□□□□□ -1.04
GTF2A1-203ENST00000553612 MMP10P09238 476 aa8.53□□□□□ -1.04
GTF2A1-203ENST00000553612 NPSP0C0P6 89 aa8.53□□□□□ -1.04
GTF2A1-203ENST00000553612 CD80P33681 288 aa8.53□□□□□ -1.04
GTF2A1-203ENST00000553612 HSPA7P48741 367 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms