RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ZNF639Q9UID6 485 aa10.41□□□□□ -0.74
RAB5C-203ENST00000546881 FBXL2Q9UKC9 423 aa10.41□□□□□ -0.74
RAB5C-203ENST00000546881 UTS2RQ9UKP6 389 aa10.41□□□□□ -0.74
RAB5C-203ENST00000546881 PACSIN3Q9UKS6 424 aa10.41□□□□□ -0.74
RAB5C-203ENST00000546881 SNX6Q9UNH7 406 aa10.41□□□□□ -0.74
RAB5C-203ENST00000546881 MPDZO75970 2070 aa10.41□□□□□ -0.74
RAB5C-203ENST00000546881 NIPBLQ6KC79 2804 aaeCLIP10.41□□□□□ -0.74
RAB5C-203ENST00000546881 A0A1B0GTL3 188 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 A0A1W2PPM1 405 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 FRG2CA6NGY1 282 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 PPP6CO00743 305 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 COPEO14579 308 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 ARHGEF9O43307 516 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 GLRA3O75311 464 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 OTCP00480 354 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 GSTA1P08263 222 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 SRD5A2P31213 254 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 CCT5P48643 541 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 EMDP50402 254 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 LHX2P50458 406 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 GFRA1P56159 465 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 CORO7P57737 925 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 GAB1Q13480 694 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 GGTA1PQ4G0N0 100 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 Q5PR19 223 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 SHEQ5VZ18 495 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 LETMD1Q6P1Q0 360 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 LARP4Q71RC2 724 aaKnown RBP eCLIP10.4□□□□□ -0.74
RAB5C-203ENST00000546881 LCA5Q86VQ0 697 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 C4orf33Q8N1A6 199 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 OR4K17Q8NGC6 315 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 SMPDL3BQ92485 455 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 KAT2AQ92830 837 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 EXOSC8Q96B26 276 aaKnown RBP10.4□□□□□ -0.74
RAB5C-203ENST00000546881 DTNBP1Q96EV8 351 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 CNRIP1Q96F85 164 aaPredicted RBP10.4□□□□□ -0.74
RAB5C-203ENST00000546881 G6PC3Q9BUM1 346 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 ROPN1BQ9BZX4 212 aaPredicted RBP10.4□□□□□ -0.74
RAB5C-203ENST00000546881 ROPN1Q9HAT0 212 aaPredicted RBP10.4□□□□□ -0.74
RAB5C-203ENST00000546881 NMRK1Q9NWW6 199 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 KLHL28Q9NXS3 571 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 SENP1Q9P0U3 644 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 CLCF1Q9UBD9 225 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 WIF1Q9Y5W5 379 aa10.4□□□□□ -0.74
RAB5C-203ENST00000546881 MED12Q93074 2177 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 A0A1W2PNV4 684 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 OR6C70A6NIJ9 312 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 C17orf51A8MQB3 221 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 A8MXE2 369 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 TO15178 435 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 RGS16O15492 202 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 SCO2O43819 266 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 SMPD2O60906 423 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 ABCB7O75027 752 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 OR4F21O95013 312 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 TGM6O95932 706 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 IL3P08700 152 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 RPS17P08708 135 aaKnown RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 KRT4P19013 534 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 CHMP24386 653 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 GRK2P25098 689 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 DPP4P27487 766 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 KCNJ5P48544 419 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 CLDN18P56856 261 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 EEF1A1P68104 462 aaKnown RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 SIRPAP78324 504 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 FAM27E3Q08E93 113 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 EFR3AQ14156 821 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 RASA2Q15283 850 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 ZNF628Q5EBL2 1059 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 TCHHL1Q5QJ38 904 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 CEP85LQ5SZL2 805 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 EEF1A1P5Q5VTE0 462 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 KRTAP1-3Q8IUG1 177 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 CDYL2Q8N8U2 506 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 OR9A2Q8NGT5 310 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 ZNF483Q8TF39 744 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 MZB1Q8WU39 189 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 ZBTB9Q96C00 473 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 EFHD2Q96C19 240 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 PIK3IP1Q96FE7 263 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 ZNF681Q96N22 645 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 UBTD1Q9HAC8 227 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 BRF2Q9HAW0 419 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 GIMAP4Q9NUV9 329 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 ARGLU1Q9NWB6 273 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 TMEM216Q9P0N5 145 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 HEY2Q9UBP5 337 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 GPR55Q9Y2T6 319 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-203ENST00000546881 OR10H1Q9Y4A9 318 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 TESMINQ9Y4I5 508 aa10.39□□□□□ -0.75
RAB5C-203ENST00000546881 VPS13CQ709C8 3753 aa10.38□□□□□ -0.75
RAB5C-203ENST00000546881 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.38□□□□□ -0.75
RAB5C-203ENST00000546881 GNG14A0A1W2PPG7 69 aa10.38□□□□□ -0.75
RAB5C-203ENST00000546881 CCDC151A5D8V7 595 aa10.38□□□□□ -0.75
RAB5C-203ENST00000546881 SLC22A20A6NK97 555 aa10.38□□□□□ -0.75
RAB5C-203ENST00000546881 A8MT66 165 aa10.38□□□□□ -0.75
RAB5C-203ENST00000546881 SMAD7O15105 426 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms