RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 CA14Q9ULX7 337 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 A0A1W2PPC4 97 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 OR5K4A6NMS3 321 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 SYT5O00445 386 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 IDUAP35475 653 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 MAZP56270 477 aaKnown RBP15.25■□□□□ 0.03
COL4A1-204ENST00000543140 ZNF628Q5EBL2 1059 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 TYW3Q6IPR3 259 aaKnown RBP15.25■□□□□ 0.03
COL4A1-204ENST00000543140 ARMC6Q6NXE6 501 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 ZNF730Q6ZMV8 503 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 OOSP2Q86WS3 158 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 KIF18BQ86Y91 864 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 ZNF655Q8N720 491 aaPredicted RBP15.25■□□□□ 0.03
COL4A1-204ENST00000543140 TSTD1Q8NFU3 115 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 PIK3R3Q92569 461 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 LRRC61Q9BV99 259 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 RBCK1Q9BYM8 510 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 OR51E2Q9H255 320 aa15.25■□□□□ 0.03
COL4A1-204ENST00000543140 CYR61O00622 381 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 MBTPS2O43462 519 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 GALR3O60755 368 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 CKMT1AP12532 417 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 GIPRP48546 466 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 GAS6Q14393 721 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 ENTPD8Q5MY95 495 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 SLC46A3Q7Z3Q1 461 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 OR9A4Q8NGU2 314 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 DIO2Q92813 273 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 ABTB1Q969K4 478 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 FAM46AQ96IP4 442 aaKnown RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 CDCA4Q9BXL8 241 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 DCSTAMPQ9H295 470 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 DSN1Q9H410 356 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 LMAN1LQ9HAT1 526 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 FBXO34Q9NWN3 711 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 KLHL28Q9NXS3 571 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 CNOT2Q9NZN8 540 aaKnown RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 NDOR1Q9UHB4 597 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 SPACA6W5XKT8 324 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 FAM221BA6H8Z2 402 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 FAM170BA6NMN3 283 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 RDH16O75452 317 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 MAOBP27338 520 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 PRKAR1BP31321 381 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 SLC15A1P46059 708 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 RGS6P49758 472 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 ALDH6A1Q02252 535 aaKnown RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 COX10Q12887 443 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 PLEKHM3Q6ZWE6 761 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 SYT13Q7L8C5 426 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 PARGQ86W56 976 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 NKAIN4Q8IVV8 208 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 CA13Q8N1Q1 262 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 OR8J1Q8NGP2 316 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 TRUB1Q8WWH5 349 aaKnown RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 Q96MT0 163 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 SDF2Q99470 211 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 MCHR1Q99705 422 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 ORAI3Q9BRQ5 295 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 MTHFD2LQ9H903 347 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 PTGFRNQ9P2B2 879 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 CLEC2DQ9UHP7 191 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 C19orf53Q9UNZ5 99 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 ZNF443Q9Y2A4 671 aaPredicted RBP15.24■□□□□ 0.03
COL4A1-204ENST00000543140 IFT52Q9Y366 437 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 KLK4Q9Y5K2 254 aa15.24■□□□□ 0.03
COL4A1-204ENST00000543140 NPIPA5A0A0B4J1W7 369 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 NPIPA7E9PJI5 369 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 GPR75O95800 540 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 NPIPA8P0DM63 369 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 CDH3P22223 829 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 ITGADQ13349 1161 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 TRAM2Q15035 370 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 ARHGAP11BQ3KRB8 267 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 RRM2BQ7LG56 351 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 IGFN1Q86VF2 1251 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 PEX5LQ8IYB4 626 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 AVL9Q8NBF6 648 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 CRELD1Q96HD1 420 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 MGLLQ99685 303 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 CHCHD6Q9BRQ6 235 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 AP3D1O14617 1153 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 CT62P0C5K7 136 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 SERPINB10P48595 397 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 PCYT1AP49585 367 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 PPM1FP49593 454 aaPredicted RBP15.23■□□□□ 0.03
COL4A1-204ENST00000543140 RELAQ04206 551 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 ST3GAL3Q11203 375 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 CLEC12AQ5QGZ9 265 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 FHL5Q5TD97 284 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 CD300LDQ6UXZ3 194 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 ZNF836Q6ZNA1 936 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 SLC34A3Q8N130 599 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 LINC00471Q8N535 108 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 ARSGQ96EG1 525 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 TSSK6Q9BXA6 273 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 GPR27Q9NS67 375 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 ZNF232Q9UNY5 417 aa15.23■□□□□ 0.03
COL4A1-204ENST00000543140 ABCA7Q8IZY2 2146 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms