RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 SLC11A1P49279 550 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 FABP6P51161 128 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 TBPL1P62380 186 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 DLX2Q07687 328 aaPredicted RBP9.46□□□□□ -0.89
COL4A6-208ENST00000538570 C14orf28Q4W4Y0 310 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 LY6G5CQ5SRR4 150 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 SLC2A11Q9BYW1 496 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 MVB12BQ9H7P6 319 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 IL21RQ9HBE5 538 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 GSRP00390 522 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 AKR1C2P52895 323 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 AWAT2Q6E213 333 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 TANGO2Q6ICL3 276 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 FAM111BQ6SJ93 734 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 GTF2H5Q6ZYL4 71 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 ASRGL1Q7L266 308 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 HMGN2P46Q86SG4 172 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF100Q8IYN0 542 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 ZFP41Q8N8Y5 198 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 TMEM185AQ8NFB2 350 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 OR2T35Q8NGX2 323 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 RAB7BQ96AH8 199 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 DNAJA3Q96EY1 480 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 DEFB126Q9BYW3 111 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 BCAS3Q9H6U6 928 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 GPATCH2Q9NW75 528 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 SH3BGRL2Q9UJC5 107 aa9.46□□□□□ -0.89
COL4A6-208ENST00000538570 FTCDNL1E5RQL4 147 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 MAGEB4O15481 346 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 PTH2RP49190 550 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 CATSPEREQ5SY80 951 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 BLOC1S3Q6QNY0 202 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 LILRB2Q8N423 598 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 BORCS7Q96B45 105 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 IMP4Q96G21 291 aaKnown RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 OR14A2Q96R54 314 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 DPH2Q9BQC3 489 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 GON7Q9BXV9 100 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 ACOT13Q9NPJ3 140 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 ANHXE9PGG2 379 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 DNAJB6O75190 326 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 RETP07949 1114 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 PSPHP78330 225 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 GRM2Q14416 872 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 RAB41Q5JT25 222 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF648Q5T619 568 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 OR4C11Q6IEV9 310 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 OR52E8Q6IFG1 317 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 METTL2BQ6P1Q9 378 aaKnown RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 TEX26Q8N6G2 289 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 BOLLQ8N9W6 283 aaKnown RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 CCDC71LQ8N9Z2 235 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 CNOT9Q92600 299 aaKnown RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 METTL2AQ96IZ6 378 aaKnown RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 SMG9Q9H0W8 520 aaKnown RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 ERVMER34-1Q9H9K5 563 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 C2orf42Q9NWW7 574 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 SAGE1Q9NXZ1 904 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 GPR83Q9NYM4 423 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-208ENST00000538570 YKT6O15498 198 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 ARPC5O15511 151 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 CA12O43570 354 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 MTNR1AP48039 350 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM35AQ53FP2 167 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 RAET1LQ5VY80 246 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 LEG1Q6P5S2 330 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 TM9SF4Q92544 642 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 MRGPRX2Q96LB1 330 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 BMFQ96LC9 184 aa9.46□□□□□ -0.9
COL4A6-208ENST00000538570 hCG_1807616A0A1W2PRN6 198 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 GGT3PA6NGU5 568 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 SC5DO75845 299 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 TP53P04637 393 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 CBR1P16152 277 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 GGT1P19440 569 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 PKLRP30613 574 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 HNRNPKP61978 463 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 CTU1Q7Z7A3 348 aaKnown RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 RCBTB1Q8NDN9 531 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 OR2T4Q8NH00 348 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 IRF7Q92985 503 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 FAM46AQ96IP4 442 aaKnown RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 PCDHGA6Q9Y5G7 932 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 CCDC163A0A0D9SF12 145 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 VSTM2BA6NLU5 285 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 HHLA1C9JL84 531 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 TFP02787 698 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 OR4D2P58180 307 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 FLI1Q01543 452 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 CCINQ13939 588 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 NPY5RQ15761 445 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 NXPE4Q6UWF7 544 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 PRSS48Q7RTY5 328 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 GPR137CQ8N3F9 429 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 GDPD1Q8N9F7 314 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 OR5AK2Q8NH90 309 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF461Q8TAF7 563 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms