RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	PIN1	Q13526	163 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PTGES3	Q15185	160 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	GPR68	Q15743	365 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SMN1	Q16637	294 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ARHGAP11B	Q3KRB8	267 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF628	Q5EBL2	1059 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	WDR45B	Q5MNZ6	344 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	DCST2	Q5T1A1	773 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	TCTN3	Q6NUS6	607 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PGBD2	Q6P3X8	592 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PODNL1	Q6PEZ8	512 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006		Q6ZPB1	254 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF367	Q7RTV3	350 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	HMGN2P46	Q86SG4	172 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF619	Q8N2I2	560 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	VWA5B2	Q8N398	1253 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SDR16C5	Q8N3Y7	309 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ARL14	Q8N4G2	192 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	FRMD1	Q8N878	549 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR4K5	Q8NGD3	323 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	RNF217	Q8TC41	542 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	FAR1	Q8WVX9	515 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	APOBEC4	Q8WW27	367 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SGCD	Q92629	289 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZDHHC12	Q96GR4	267 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CRELD1	Q96HD1	420 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	C10orf90	Q96M02	699 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	DGAT2	Q96PD7	388 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	STAC	Q99469	402 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PELO	Q9BRX2	385 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ITPA	Q9BY32	194 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ANKRD19P	Q9H560	264 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	EVA1A	Q9H8M9	152 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	MTHFD2L	Q9H903	347 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SYNPO2L	Q9H987	977 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	GPN2	Q9H9Y4	310 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CAPN10	Q9HC96	672 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ACOT13	Q9NPJ3	140 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CTPS2	Q9NRF8	586 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	STARD5	Q9NSY2	213 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	TBC1D23	Q9NUY8	699 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	C14orf105	Q9NVL8	296 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	KCMF1	Q9P0J7	381 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	AASS	Q9UDR5	926 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	FTSJ1	Q9UET6	329 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PSORS1C1	Q9UIG5	152 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	ACAD8	Q9UKU7	415 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	C19orf53	Q9UNZ5	99 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PLCL2	Q9UPR0	1127 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SATB2	Q9UPW6	733 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	SIT1	Q9Y3P8	196 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	PCDHGA10	Q9Y5H3	936 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006	CHD8	Q9HCK8	2581 aa		10.07	□□□□□ -0.8
SPIDR-222	ENST00000524006		A0A1W2PS29	197 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	FFAR1	O14842	300 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	DYRK3	O43781	588 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	FGF17	O60258	216 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	MAN1A2	O60476	641 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	SRPX2	O60687	465 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	WBP4	O75554	376 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	ATE1	O95260	518 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZBTB11	O95625	1053 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	CDK1	P06493	297 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	THBS1	P07996	1170 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	ACP2	P11117	423 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	LSS	P48449	732 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	SMS	P52788	366 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	PDX1	P52945	283 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	PPP1CA	P62136	330 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	C1D	Q13901	141 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	MAPK11	Q15759	364 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	TCTE1	Q5JU00	501 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLX4IP	Q5VYV7	408 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	AP1AR	Q63HQ0	302 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	GTF2IRD2B	Q6EKJ0	949 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	LAIR2	Q6ISS4	152 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	OLIG3	Q7RTU3	272 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	GTF2IRD2	Q86UP8	949 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	VRK2	Q86Y07	508 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	ANKRD13B	Q86YJ7	626 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	RBM45	Q8IUH3	476 aa	Known RBP	10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	LACC1	Q8IV20	430 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	CROCCP3	Q8IVE0	287 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	C1orf210	Q8IVY1	113 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	GALNT12	Q8IXK2	581 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	SPEM1	Q8N4L4	309 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	CAMKK1	Q8N5S9	505 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	TOR1AIP2	Q8NFQ8	470 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR6T1	Q8NGN1	323 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR9Q1	Q8NGQ5	310 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	OR9A4	Q8NGU2	314 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	RHOXF1	Q8NHV9	184 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	ZNF675	Q8TD23	568 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	APH1B	Q8WW43	257 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	SLC35A4	Q96G79	324 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	TGM7	Q96PF1	710 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	CD180	Q99467	661 aa		10.06	□□□□□ -0.8
SPIDR-222	ENST00000524006	MCHR1	Q99705	422 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms