RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RGS14O43566 566 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 SKAP2O75563 359 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 LYPLA1O75608 230 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 BCAS2O75934 225 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 IGFBP2P18065 325 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 PRPH2P23942 346 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 MSX1P28360 303 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 IL12BP29460 328 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 NTSP30990 170 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 GSTM5P46439 218 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 GAS1P54826 345 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 NAA20P61599 178 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 TLE4Q04727 773 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 SRYQ05066 204 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 GAB1Q13480 694 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 WDR93Q6P2C0 686 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 TMEM81Q6P7N7 255 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 DDIASQ8IXT1 998 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 SAMD14Q8IZD0 417 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 RIBC1Q8N443 379 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 RELL2Q8NC24 303 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 CAVIN3Q969G5 261 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 ABTB1Q969K4 478 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 ELP4Q96EB1 424 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 OTUB1Q96FW1 271 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 SLC35A4Q96G79 324 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 WDYHV1Q96HA8 205 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 FCRL1Q96LA6 429 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 TRIB1Q96RU8 372 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 SPOCK3Q9BQ16 436 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 TREX2Q9BQ50 279 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 C1orf50Q9BV19 199 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 RUBCNLQ9H714 662 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 DDX18Q9NVP1 670 aaKnown RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 TAS2R9Q9NYW1 312 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 TAS2R7Q9NYW3 318 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 ZDHHC2Q9UIJ5 367 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 MID2Q9UJV3 735 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 C19orf53Q9UNZ5 99 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 RPH3AQ9Y2J0 694 aaPredicted RBP9.66□□□□□ -0.86
NELFE-213ENST00000494956 OR10H1Q9Y4A9 318 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 TRAF6Q9Y4K3 522 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 WIF1Q9Y5W5 379 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 NUP214P35658 2090 aaPredicted RBP9.65□□□□□ -0.86
NELFE-213ENST00000494956 WDR91A4D1P6 747 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 H3BQF6 201 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PLOD2O00469 737 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PDPK1O15530 556 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ITM2AO43736 263 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 TYROBPO43914 113 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 GMFGO60234 142 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 NPHS1O60500 1241 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PEX11AO75192 247 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PSMG1O95456 288 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 EPPINO95925 133 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 IGKV1D-16P01601 117 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 GABRA1P14867 456 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 BMP5P22003 454 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 GRK2P25098 689 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ELAVL4P26378 380 aaKnown RBP9.65□□□□□ -0.86
NELFE-213ENST00000494956 KRT20P35900 424 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ZNF136P52737 540 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PRKAG1P54619 331 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ZNF844Q08AG5 666 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 STX5Q13190 355 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 RIPPLY2Q5TAB7 128 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 POMZP3Q6PJE2 187 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 EXOC3L1Q86VI1 746 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PLCZ1Q86YW0 608 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 TRIM42Q8IWZ5 723 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 DMRTC2Q8IXT2 367 aaPredicted RBP9.65□□□□□ -0.86
NELFE-213ENST00000494956 CLYBLQ8N0X4 340 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 OR2L13Q8N349 312 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ZNF454Q8N9F8 522 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 OR7A2PQ8NGA2 310 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 OR14L1PQ8NHC6 308 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 FAM76AQ8TAV0 307 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PIK3R3Q92569 461 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 TMCO6Q96DC7 493 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ERP27Q96DN0 273 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 PPP1R36Q96LQ0 422 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 CCT7Q99832 543 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 YIPF4Q9BSR8 244 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ROPN1BQ9BZX4 212 aaPredicted RBP9.65□□□□□ -0.86
NELFE-213ENST00000494956 PRDM14Q9GZV8 571 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 REEP4Q9H6H4 257 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ROPN1Q9HAT0 212 aaPredicted RBP9.65□□□□□ -0.86
NELFE-213ENST00000494956 MED11Q9P086 117 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 SH3BP4Q9P0V3 963 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ITGB1BP2Q9UKP3 347 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 CBLCQ9ULV8 474 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 ADGRG4Q8IZF6 3080 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 MED12LQ86YW9 2145 aa9.65□□□□□ -0.86
NELFE-213ENST00000494956 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 A0A087WV62 115 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 AHRRA9YTQ3 701 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 ZNF500O60304 480 aaPredicted RBP9.64□□□□□ -0.87
NELFE-213ENST00000494956 COQ9O75208 318 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 CBR3O75828 277 aa9.64□□□□□ -0.87
NELFE-213ENST00000494956 BPGMP07738 259 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms