RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 STX5Q13190 355 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRKG2Q13237 762 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 GRB7Q14451 532 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ARHGAP19Q14CB8 494 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ABRAXAS2Q15018 415 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SNCBQ16143 134 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCDC6Q16204 474 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 AP5B1Q2VPB7 878 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCSMST1Q4G0I0 132 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PYCR3Q53H96 274 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 XKR7Q5GH72 579 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 C1orf146Q5VVC0 180 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 LIPJQ5W064 366 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM219BQ5XKK7 198 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 FRG2Q64ET8 278 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 REP15Q6BDI9 236 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 MED27Q6P2C8 311 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMEM71Q6P5X7 295 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CYB5D1Q6P9G0 228 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 KLHL17Q6TDP4 642 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SUSD1Q6UWL2 747 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 LCTLQ6UWM7 567 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 GCNT7Q6ZNI0 430 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM83HQ6ZRV2 1179 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 RNF165Q6ZSG1 346 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ASRGL1Q7L266 308 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF367Q7RTV3 350 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ADCK2Q7Z695 626 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 FJX1Q86VR8 437 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 KLHDC8AQ8IYD2 350 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 UBALD2Q8IYN6 164 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TBC1D21Q8IYX1 336 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 DEFB107AQ8IZN7 70 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 FAM9CQ8IZT9 166 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PGAM4Q8N0Y7 254 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TBC1D19Q8N5T2 526 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CPSF7Q8N684 471 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ATG16L2Q8NAA4 619 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PCYOX1LQ8NBM8 494 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 RBM15BQ8NDT2 890 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR5AR1Q8NGP9 310 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR5K2Q8NHB8 316 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CDC26Q8NHZ8 85 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CEP76Q8TAP6 659 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC5A11Q8WWX8 675 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ADAMTS14Q8WXS8 1223 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR1E3Q8WZA6 343 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 STARD8Q92502 1023 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 RSC1A1Q92681 617 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 UBE2E3Q969T4 207 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CXorf40BQ96DE9 158 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 C3orf30Q96M34 536 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 IL17FQ96PD4 163 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 FRG2BQ96QU4 278 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 HAUS8Q9BT25 410 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 THTPAQ9BU02 230 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 EFCAB11Q9BUY7 163 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 IFT27Q9BW83 186 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TBC1D10AQ9BXI6 508 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 MRPL1Q9BYD6 325 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 GSDMCQ9BYG8 508 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 DPY30Q9C005 99 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF700Q9H0M5 742 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PCBD2Q9H0N5 130 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 C1orf21Q9H246 121 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR52A5Q9H2C5 316 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 MMADHCQ9H3L0 296 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TUBB1Q9H4B7 451 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF385DQ9H6B1 395 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 MVB12BQ9H7P6 319 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 EFCAB1Q9HAE3 211 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 LRTM1Q9HBL6 345 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 FGF22Q9HCT0 170 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PLSCR4Q9NRQ2 329 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 AIG1Q9NVV5 245 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 C1orf109Q9NX04 203 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 LRFN1Q9P244 771 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 GIMAP2Q9UG22 337 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TAC3Q9UHF0 121 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 BAIAP2L1Q9UHR4 511 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRPF19Q9UMS4 504 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC17A4Q9Y2C5 497 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 CA5BQ9Y2D0 317 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 PCYT1BQ9Y5K3 369 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 COLEC10Q9Y6Z7 277 aa3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 TNRC6BQ9UPQ9 1833 aaKnown RBP3.58□□□□□ -1.84
HMGB3P20-201ENST00000417997 KCNE1BA0A087WTH5 132 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A087WV62 115 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 C15orf38-AP3S2A0A0A6YYH1 394 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 IGHV1OR15-9A0A0B4J2B8 117 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 A8MUI8 341 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 LSM1O15116 133 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CFLARO15519 480 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 PDE5AO76074 875 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ATP6V1G2O95670 118 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 HLA-DQA2P01906 255 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 IGHV4-34P06331 123 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 C1GALT1C1LP0DN25 315 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms