RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 TRPS1Q9UHF7 1281 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 C13orf42A0A1B0GVH6 325 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 A0A1W2PPL8 197 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 A0A1W2PRU2 124 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 MTMR11A4FU01 709 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CDK2AP1O14519 115 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 KLKB1P03952 638 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 GKN3PP0CG01 181 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ATP1B2P14415 290 aaPredicted RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 RHCEP18577 417 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 MAP2K6P52564 334 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CTSCP53634 463 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ARSIQ5FYB1 569 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CCNJQ5T5M9 372 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ZDHHC20Q5W0Z9 365 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CRTC1Q6UUV9 634 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 KCTD9Q7L273 389 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CCDC190Q86UF4 302 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 C17orf64Q86WR6 236 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 FAM219AQ8IW50 185 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SLC7A13Q8TCU3 470 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ADAMTS15Q8TE58 950 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SAMD8Q96LT4 415 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 REEP4Q9H6H4 257 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 IL23AQ9NPF7 189 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SCML1Q9UN30 329 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 A0A0U1RQF3 1178 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ZNF670-ZNF695F2Z2N8 137 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 H7C2Y5 167 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 GABRPO00591 440 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 PPM1DO15297 605 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CACNG3O60359 315 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 NUDT14O95848 222 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 OSMP13725 252 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 TIA1P31483 386 aaKnown RBP eCLIP8.32□□□□□ -1.084e-8■■■□□ 16.3
RTN4-206ENST00000394611 ERVK-21P61565 698 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SEC23BQ15437 767 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 RAB41Q5JT25 222 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CNKSR3Q6P9H4 555 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 TMEM107Q6UX40 140 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SLC24A5Q71RS6 500 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 COMMD2Q86X83 199 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CDK20Q8IZL9 346 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 OR10G6Q8NH81 332 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 PMM1Q92871 262 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 NXPE2Q96DL1 559 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CCDC115Q96NT0 180 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ERVMER34-1Q9H9K5 563 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 FKBP14Q9NWM8 211 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ZDHHC3Q9NYG2 299 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SCML2Q9UQR0 700 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 LTBP2Q14767 1821 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 TP53BP1Q12888 1972 aaPredicted RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 AOAHP28039 575 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 MAT2AP31153 395 aaKnown RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 DEFB103AP81534 67 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 HAGHLQ6PII5 290 aaPredicted RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 MTSS1LQ765P7 747 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 GPR155Q7Z3F1 870 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ZNF761Q86XN6 746 aaPredicted RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 FBXO22Q8NEZ5 403 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 DNAJA4Q8WW22 397 aaPredicted RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 PGAP3Q96FM1 320 aaPredicted RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 ORAI3Q9BRQ5 295 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 DPH1Q9BZG8 443 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 POPDC3Q9HBV1 291 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 AHSPQ9NZD4 102 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 KLHL21Q9UJP4 597 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CHST2Q9Y4C5 530 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 CACNG2Q9Y698 323 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 PDCD5O14737 125 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 ATG12O94817 140 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 UBL4AP11441 157 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 JUNDP17535 347 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 ZFP36L2P47974 494 aaKnown RBP8.31□□□□□ -1.08
RTN4-206ENST00000394611 DGCR2P98153 550 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 SFRP5Q5T4F7 317 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 YOD1Q5VVQ6 348 aaPredicted RBP8.31□□□□□ -1.08
RTN4-206ENST00000394611 TAS1R1Q7RTX1 841 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 SERPINA11Q86U17 422 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 SIAH3Q8IW03 269 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 GATSQ8NAP1 163 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 NAXEQ8NCW5 288 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 PIGXQ8TBF5 258 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
RTN4-206ENST00000394611 ZMYND19Q96E35 227 aaPredicted RBP8.31□□□□□ -1.08
RTN4-206ENST00000394611 SGTBQ96EQ0 304 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 MSLNLQ96KJ4 702 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 SAMD11Q96NU1 681 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 TRAF4Q9BUZ4 470 aaPredicted RBP8.31□□□□□ -1.08
RTN4-206ENST00000394611 TMEM231Q9H6L2 316 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 TAS2R10Q9NYW0 307 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 SPG21Q9NZD8 308 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 COMMD9Q9P000 198 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 ERI3O43414 337 aaKnown RBP8.31□□□□□ -1.08
RTN4-206ENST00000394611 KDELR3O43731 214 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 EGFP01133 1207 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 EPOP01588 193 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 FGBP02675 491 aa8.31□□□□□ -1.08
RTN4-206ENST00000394611 LRG1P02750 347 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms