RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 SNAPC1Q16533 368 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 CTU2Q2VPK5 515 aaKnown RBP8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 ZNF691Q5VV52 312 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 B3GNT6Q6ZMB0 384 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 LSRQ86X29 649 aaPredicted RBP8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 CDK20Q8IZL9 346 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 CLIP4Q8N3C7 705 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 SLC7A13Q8TCU3 470 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 ADAMTS16Q8TE57 1224 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 TRNT1Q96Q11 434 aaKnown RBP8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 SMOC1Q9H4F8 434 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 CLN6Q9NWW5 311 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 ERVK-18Q9QC07 812 aa8.13□□□□□ -1.11
CALCOCO2-201ENST00000258947 THADAQ6YHU6 1953 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 DENND4AQ7Z401 1863 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 GXYLT2A0PJZ3 443 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PRAMEF27A3QJZ7 478 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 CDC14CA4D256 554 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PATE3B3GLJ2 98 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 RPLP0P05388 317 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 CT62P0C5K7 136 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 MAP2K4P45985 399 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 MLLT10P55197 1068 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 TUBA4AP68366 448 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 EEF1A2Q05639 463 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PMS2P3Q13401 168 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 HLA-BQ31612 363 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 EIPR1Q53HC9 387 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 VWA2Q5GFL6 755 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PODNL1Q6PEZ8 512 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 ZNF773Q6PK81 442 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 SMARCD3Q6STE5 483 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 CCDC80Q76M96 950 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PIGXQ8TBF5 258 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 THAP3Q8WTV1 239 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 KLHL6Q8WZ60 621 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 CNDP2Q96KP4 475 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PINK1Q9BXM7 581 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 SLC38A1Q9H2H9 487 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 IFT52Q9Y366 437 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 GPC6Q9Y625 555 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 K7ESF4 209 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 GTPBP1O00178 669 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 FAAHO00519 579 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 NUDT21O43809 227 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 REM1O75628 298 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 SLC35E2P0CK97 266 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 ACP2P11117 423 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 CRHBPP24387 322 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 CNR2P34972 360 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 FRKP42685 505 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 GPR4P46093 362 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 IL18R1Q13478 541 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 RAB39AQ14964 217 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PRPF38BQ5VTL8 546 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 GUSBP11Q6P575 273 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 TSPYL5Q86VY4 417 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PRR22Q8IZ63 422 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 FAM46AQ96IP4 442 aaKnown RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 C10orf90Q96M02 699 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 WFDC6Q9BQY6 131 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 DUSP15Q9H1R2 295 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 TMEM27Q9HBJ8 222 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 KRCC1Q9NPI7 259 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 DNAJC27Q9NZQ0 273 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 FTSJ1Q9UET6 329 aa8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 C19orf53Q9UNZ5 99 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 ARID1BQ8NFD5 2236 aaPredicted RBP8.12□□□□□ -1.11
CALCOCO2-201ENST00000258947 PRAMEF25A6NGN4 478 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 ZNF749O43361 778 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 ABCB7O75027 752 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 NSA2O95478 260 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 IGFBP1P08833 259 aaPredicted RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 CCNA2P20248 432 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 ELAVL4P26378 380 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 NOS3P29474 1203 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 CLK1P49759 484 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 CRISP1P54107 249 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 RPS7P62081 194 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 MAP4K2Q12851 820 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 TRAM2Q15035 370 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 PTGES3Q15185 160 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 GPR155Q7Z3F1 870 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 TCEANCQ8N8B7 351 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 CLDN23Q96B33 292 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 EFHD2Q96C19 240 aaPredicted RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 SDF2Q99470 211 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 DUSP23Q9BVJ7 150 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 PIGUQ9H490 435 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 EXOSC4Q9NPD3 245 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 FBXO34Q9NWN3 711 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 CHCHD3Q9NX63 227 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 H2AFY2Q9P0M6 372 aaPredicted RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 COMMD3-BMI1R4GMX3 469 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 MAP1BP46821 2468 aaKnown RBP8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 CYR61O00622 381 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 SIGLEC6O43699 453 aa8.11□□□□□ -1.11
CALCOCO2-201ENST00000258947 TLX2O43763 284 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms