RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 CDC42EP4Q9H3Q1 356 aaKnown RBP12.91□□□□□ -0.34
TUBB3-210ENST00000555810 RPF2Q9H7B2 306 aaKnown RBP12.91□□□□□ -0.34
TUBB3-210ENST00000555810 IPPKQ9H8X2 491 aa12.91□□□□□ -0.34
TUBB3-210ENST00000555810 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
TUBB3-210ENST00000555810 ALPK2Q86TB3 2170 aa12.91□□□□□ -0.34
TUBB3-210ENST00000555810 IQANK1A0A1B0GTG1 560 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 LRRC14BA6NHZ5 514 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 NDUFS7O75251 213 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 CLDN9O95484 217 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 THBDP07204 575 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 COL6A2P12110 1019 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 PTPN6P29350 595 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 MAGEA12P43365 314 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 RPS13P62277 151 aaKnown RBP12.9□□□□□ -0.34
TUBB3-210ENST00000555810 CPSF6Q16630 551 aaKnown RBP eCLIP12.9□□□□□ -0.34
TUBB3-210ENST00000555810 SPRED3Q2MJR0 410 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 ALKBH2Q6NS38 261 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 BHLHB9Q6PI77 547 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 ANGPTL8Q6UXH0 198 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 RNF111Q6ZNA4 994 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 IL17RELQ6ZVW7 336 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 ST13P4Q8IZP2 240 aaPredicted RBP12.9□□□□□ -0.34
TUBB3-210ENST00000555810 OR1J4Q8NGS1 313 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 OR14L1PQ8NHC6 308 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 SPPL2AQ8TCT8 520 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 PAFAH2Q99487 392 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 DDX31Q9H8H2 851 aaKnown RBP12.9□□□□□ -0.34
TUBB3-210ENST00000555810 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 ELOVL5Q9NYP7 299 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 DMGDHQ9UI17 866 aaKnown RBP12.9□□□□□ -0.34
TUBB3-210ENST00000555810 ZNF180Q9UJW8 692 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 FREM1Q5H8C1 2179 aa12.9□□□□□ -0.34
TUBB3-210ENST00000555810 MEGF8Q7Z7M0 2845 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 A0A0A6YYD5 115 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 STX16-NPEPL1H3BU86 382 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 PLOD2O00469 737 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 STX16O14662 325 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 SEMA3DO95025 777 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 IGHV4-39P01824 125 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 ALOX15P16050 662 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-210ENST00000555810 SRD5A1P18405 259 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 TBXA2RP21731 343 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 CASP3P42574 277 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 CCNG1P51959 295 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
TUBB3-210ENST00000555810 HERVK_113P63132 956 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 ERVK-8P63133 956 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 TIGD3Q6B0B8 471 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 MRM1Q6IN84 353 aaKnown RBP12.89□□□□□ -0.35
TUBB3-210ENST00000555810 CYP20A1Q6UW02 462 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 MILR1Q7Z6M3 343 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 NUDT13Q86X67 352 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 RNF175Q8N4F7 328 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 PTGR2Q8N8N7 351 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-210ENST00000555810 ZNF610Q8N9Z0 462 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 WDR20Q8TBZ3 569 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 ATP6V1E2Q96A05 226 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 SERPINI1Q99574 410 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 NTMT1Q9BV86 223 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 SORBS1Q9BX66 1292 aaKnown RBP12.89□□□□□ -0.35
TUBB3-210ENST00000555810 ERVK-6Q9BXR3 956 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 ZNF717Q9BY31 904 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-210ENST00000555810 LPAR3Q9UBY5 353 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 GDF2Q9UK05 429 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-210ENST00000555810 ERVK-19Q9WJR5 959 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 LIPT1Q9Y234 373 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 DTX4Q9Y2E6 619 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 RNF11Q9Y3C5 154 aa12.89□□□□□ -0.35
TUBB3-210ENST00000555810 OVOL3O00110 214 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 SMIM24O75264 130 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 GPR75O95800 540 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 SOD3P08294 240 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 FAM58BPP0C7Q3 252 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 CTAGE8P0CG41 777 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 NR2F6P10588 404 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 DPP4P27487 766 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 CFPP27918 469 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 GALNSP34059 522 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 BSGP35613 385 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 ARL1P40616 181 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-210ENST00000555810 CASP9P55211 416 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 SLC37A1P57057 533 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 FAPQ12884 760 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 ZNF267Q14586 743 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-210ENST00000555810 TMEM249Q2WGJ8 235 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 C18orf63Q68DL7 685 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 C12orf54Q6X4T0 127 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 WFDC8Q8IUA0 241 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 CTAGE4Q8IX94 777 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 PRR22Q8IZ63 422 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 PLD6Q8N2A8 252 aaKnown RBP12.88□□□□□ -0.35
TUBB3-210ENST00000555810 IFT81Q8WYA0 676 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 TP53INP1Q96A56 240 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 ZNF845Q96IR2 970 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-210ENST00000555810 RHNO1Q9BSD3 238 aa12.88□□□□□ -0.35
TUBB3-210ENST00000555810 NOL11Q9H8H0 719 aaKnown RBP12.88□□□□□ -0.35
TUBB3-210ENST00000555810 SERHLQ9NQF3 203 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms